| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amir_1347 |
|---|
| Symbol | |
|---|
| ID | 8325527 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Actinosynnema mirum DSM 43827 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013093 |
|---|
| Strand | + |
|---|
| Start bp | 1489439 |
|---|
| End bp | 1490266 |
|---|
| Gene Length | 828 bp |
|---|
| Protein Length | 275 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 80% |
|---|
| IMG OID | 644941895 |
|---|
| Product | NmrA family protein |
|---|
| Protein accession | YP_003099145 |
|---|
| Protein GI | 256375485 |
|---|
| COG category | [G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0702] Predicted nucleoside-diphosphate-sugar epimerases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.142446 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGAGCGTCG TGGTGATCGG CGCGAGCGGC ACCACCGGCC GGGCGCTCAC CGCCCTGCTG
GAGGCGGGCG GCACCCCGTT CCGGCGGGCC GGCCGCACCC CGGCCGCGGG CACGACCGCG
TTCGACTGGC ACGACCCGAG CACCCACCGC GCGCTCCTGG ACGGCGCGAC CGCCGTCTAC
GCCGTCCCGC CGCCCACCAC CGGCGACCCG CTGCCCGCCG TGCGCCCGCT GCTGGACCTG
GCCCGCCGCA CCGGCCTGCC CAGGCTCGTG CTGCTCGGCT CCCTCGCGGT CCTGCCGGAC
GCCCCCGGCG CCGCCGAGCT GGAGGCCGAG GTGCGCGGGA CCCCCGGCTG GTCCGTGCTG
CGGCCCGCCG GGTTCATGCA GAACTTCACC GGCGCGCACC CGCTGGCCGC GCGGGTGCGC
GAGCGCGGCG AGCTGCTGTC GGCGAGCGGC GACGGCCGGG TCGGCTGGAT CGACGCGCGG
GACGTGGCCG CCGCCGCGCA CGCCGCCCTC CTCGCCGACC GGACCGGGTC CGAGCACCGG
CTCACCGGGC CGCAGGCGCT GAGCTACCCG GAGGCCGCGC GGATCATCAC CGAGCGGACC
GGGCGGGCCG TCCAGGTGGT GGAGGTCTCC GCCGACGAGC TGGCCGGGCA CTTCCGGGCG
GCCGGGATGC CCGCCCCGTT CGCCGACCGC CTCGCCCGCT ACAACGCCGC GGTCCGCGAC
GGCGGCGAGG GGGAACTGAC CGACGGCGTC ACCCGGCTCA CCGGGCGCGC GCCGCGCCCG
TTCGCCGGGT TCGTCGACGA CCACCGCGCG GAGTGGGTCA CCGGCTAA
|
|---|
| Protein sequence | MSVVVIGASG TTGRALTALL EAGGTPFRRA GRTPAAGTTA FDWHDPSTHR ALLDGATAVY
AVPPPTTGDP LPAVRPLLDL ARRTGLPRLV LLGSLAVLPD APGAAELEAE VRGTPGWSVL
RPAGFMQNFT GAHPLAARVR ERGELLSASG DGRVGWIDAR DVAAAAHAAL LADRTGSEHR
LTGPQALSYP EAARIITERT GRAVQVVEVS ADELAGHFRA AGMPAPFADR LARYNAAVRD
GGEGELTDGV TRLTGRAPRP FAGFVDDHRA EWVTG
|
|---|
| |