Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Amir_1221 |
Symbol | |
ID | 8325398 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Actinosynnema mirum DSM 43827 |
Kingdom | Bacteria |
Replicon accession | NC_013093 |
Strand | + |
Start bp | 1364625 |
End bp | 1365668 |
Gene Length | 1044 bp |
Protein Length | 347 aa |
Translation table | 11 |
GC content | 78% |
IMG OID | 644941766 |
Product | 2-nitropropane dioxygenase NPD |
Protein accession | YP_003099019 |
Protein GI | 256375359 |
COG category | [R] General function prediction only |
COG ID | [COG2070] Dioxygenases related to 2-nitropropane dioxygenase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.665213 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCTGCTGG AATCGCTCCC GGTCCCGGTG ATCGCCGCCC CGATGGCGGG TGGCCCGTCC ACCCCCGAGC TCGTCGCCGC GGTGGGCGGC GCGGGCGGGC TCGGCTTCCT CCCGGCGGGC TACCTGACGC CCGACGCGCT GGCCGACCGC ATCGCCCGCA CCACCGCGCT GTCCACCGCG CCGTTCGGCG TCAACCTGTT CGTGCCCGGC CCGGACGGCG GCGCCGCCGA GGCGCGGGCC TACCGGCGGC TGCTGGTCGA CCAGTCGGGC CTCGAACCGG GCGAGCCGCG CTGGGACGAC GACTCCTACC CGGCCAAGCT GGAGCTCCTC CTGGCGCTGC GCGTCCCGGT GGTCTCGTTC ACGTTCGGCC TGCCGTCGGC CTCCGACGTC GACCGGCTGC GCGCGGCGGG GACCACCACC GTCGCCACCG TCACCACCCC CGCCGAGGCC GAGCAGGCCG CGCGGGTCGG CGTCGACGCG CTGTGCGTGC AGGGCGTCGA CGCCGGTGGC CACCGGGGCA CCTTCGCCGA CGACGGCCGC AGCCCCGGCG GCGGCGAGCT GCTCGGCCTG CTGACCGCGT TGCGCCTGGT CGGCGCCCGC GTCTCGCTCC CGCTCATCGC GGCGGGCGGC ATCGCGCACG GCGCGGACGT CGCCGCCGTC CTCGCCGCCG GGGCGGTCGC CGCGCAGCTC GGCACCGCGT TCCTGGCCTG CCCCGAGGCG GGCACCGCGC CCGCGCACCG CCAAGCCCTC GCCGAAGGCA CCCGGCGCAC CGCGCTGACC AGGGCGTTCA GCGGCAGGCC CGCGCGCGGG CTGGTCAACC GGTTCCTCAC CGAGCACACC CCGCACGCCC CGGCCGCCTA CCCGAGGGTG CACCACCTGA CCAAGCCGAT CCGCGCGTCC GGCGACCCCG AGCTGATGTC GATGTGGGCC GGGCAGGCGT ACCCCCTGGC CCGTTCGGTC CCGGCCGCCC AGCTGGTCGC CGACCTGAAC GGGCAGGCCG TCGAGGCCAT CGCGCGGGCC AACGCGCGGA TTCGCCCGCT CTAG
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Protein sequence | MLLESLPVPV IAAPMAGGPS TPELVAAVGG AGGLGFLPAG YLTPDALADR IARTTALSTA PFGVNLFVPG PDGGAAEARA YRRLLVDQSG LEPGEPRWDD DSYPAKLELL LALRVPVVSF TFGLPSASDV DRLRAAGTTT VATVTTPAEA EQAARVGVDA LCVQGVDAGG HRGTFADDGR SPGGGELLGL LTALRLVGAR VSLPLIAAGG IAHGADVAAV LAAGAVAAQL GTAFLACPEA GTAPAHRQAL AEGTRRTALT RAFSGRPARG LVNRFLTEHT PHAPAAYPRV HHLTKPIRAS GDPELMSMWA GQAYPLARSV PAAQLVADLN GQAVEAIARA NARIRPL
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