| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amir_1216 |
|---|
| Symbol | |
|---|
| ID | 8325393 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Actinosynnema mirum DSM 43827 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013093 |
|---|
| Strand | - |
|---|
| Start bp | 1359587 |
|---|
| End bp | 1361428 |
|---|
| Gene Length | 1842 bp |
|---|
| Protein Length | 613 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 644941761 |
|---|
| Product | GTP-binding protein LepA |
|---|
| Protein accession | YP_003099014 |
|---|
| Protein GI | 256375354 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0481] Membrane GTPase LepA |
|---|
| TIGRFAM ID | [TIGR00231] small GTP-binding protein domain
[TIGR01393] GTP-binding protein LepA |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGAGCACGT TCGCCGACCA GACGTTCACG CCTCCGGAGC TCATCCGGAA CTTCTGCATC
ATCGCGCACA TCGACCACGG CAAGTCCACC CTGGCCGACC GGATGCTGCA GCTCACCGGC
GTGGTCGAGG AGCGGGCGAT GCGCGCGCAG TACCTCGACC GCATGGACAT CGAGCGCGAG
CGCGGCATCA CGATCAAGGC GCAGAACGTG CGCCTGCCGT GGGCCGTGAA CGGGACCGAC
CACGTCCTGC ACATGATCGA CACGCCGGGT CACGTCGACT TCACCTACGA GGTGTCCCGC
GCGCTGGAGG CGTGCGAGGG CGCGGTCCTG CTCGTGGACG CCGCCCAGGG CATCGAGGCC
CAGACGCTGG CCAACCTGTA CCTGGCGATG GAGAACGACC TCACCATCAT CCCGGTGCTG
AACAAGATCG ACCTGCCCGC GGCCGACCCG GACAAGTACG CCAAGGAGAT CGCCCACATC
GTCGGGTGCG AACCGGACGA GGTGCTGCGC GTCTCGGCCA AGACGGGCCT GGGCGTCGGC
GATCTGCTGG ACGAGGTCGT GCGCAAGGTG CCCGCGCCCG TCGGCGACGC CGAGGCCCCC
GCCAGGGCGA TGATCTTCGA CTCGGTGTAC GACACGTACC GGGGCGTGGT GACCTACATC
CGGGTCGTCG ACGGCAAGAT CACCCCGCGC GAGCGGATCA AGATGATGTC CACCGGCGCC
ACGCACGAGC TGCTGGAGGT CGGGATCATC TCGCCCGAGC CCAAGCCCAG CAGGGGCCTT
GGCGTCGGCG AGGTCGGCTA CCTGATCACC GGCGTGAAGG ACGTGCGCCA GTCCAAGGTC
GGCGACACCG TGACCTGGGA CAAGAAGGGC GCCACCGAGC CGCTGGCGGG CTACCGCGAG
CCGAGGCCGA TGGTGTACTC GGGCCTGTAC CCGGTCGACG GCTCCGACTA CCCGGTGCTG
CGCGAGGCGC TGGAGAAGCT CCAGCTCAAC GACGCGGCGC TGACCTTCGA GCCGGAGACG
TCGGCGGCGC TGGGCTTCGG CTTCCGCTGC GGCTTCCTGG GCCTGCTGCA CCTGGAGATC
ACCCGCGACC GCCTGGAGCG CGAGTTCGAC CTCGACCTGA TCTCGACCGC GCCGAACGTG
GTGTACCGGG TCGTGATGGA GGACGGCGCC GAGCACGTGG TGACGAACCC GTCGGACTGG
CCGGACGGCA AGCGCGCCGA GGTGTACGAG CCGGTCACCC GCTGCACGAT CATCGCGCCG
AGCGACTACA TCGGCGCGAT CATGGAGCTG TGCCAGGCCA AGCGCGGCCA GCTGGGCGGC
ATGGACTACC TGTCCGAGGA CCGCGTGGAG CTGCGCTACA CGATGCCGCT CGGCGAGATC
ATCTTCGACT TCTTCGACGC GCTGAAGTCC CGCACGCGCG GGTACGCGTC GCTGGACTAC
GAGGAGTCGG GCGAGCAGGA GTCCGAGCTG GTCAAGGTCG ACATCCTGCT GCAGGGCGAG
GCGGTGGACG CGTTCAGCGC GATCGTCCAC AAGGACCACG CGTACGGGTA CGGCACGCGG
ATGGCCACGA AGCTGCGCGA GCTGATCCCG AGGCAGCAGT TCGAGGTGCC GATCCAGGCC
GCGGTGGGCT CGCGCGTGAT CGCCCGCGAG ACGATCCGCG CGATCCGCAA GGACGTGCTG
GCGAAGTGCT ACGGCGGTGA CATCACCCGC AAGCGCAAGC TGCTGGAGAA GCAGAAGGAG
GGCAAGAAGC GCATGAAGAT GGTCGGGCGG GTCGAGGTCC CCCAGGAGGC CTTCGTGGCC
GCGCTCTCCA CGGACGACTC GAAGGAGAAG GGGAAGAAGT AG
|
|---|
| Protein sequence | MSTFADQTFT PPELIRNFCI IAHIDHGKST LADRMLQLTG VVEERAMRAQ YLDRMDIERE
RGITIKAQNV RLPWAVNGTD HVLHMIDTPG HVDFTYEVSR ALEACEGAVL LVDAAQGIEA
QTLANLYLAM ENDLTIIPVL NKIDLPAADP DKYAKEIAHI VGCEPDEVLR VSAKTGLGVG
DLLDEVVRKV PAPVGDAEAP ARAMIFDSVY DTYRGVVTYI RVVDGKITPR ERIKMMSTGA
THELLEVGII SPEPKPSRGL GVGEVGYLIT GVKDVRQSKV GDTVTWDKKG ATEPLAGYRE
PRPMVYSGLY PVDGSDYPVL REALEKLQLN DAALTFEPET SAALGFGFRC GFLGLLHLEI
TRDRLEREFD LDLISTAPNV VYRVVMEDGA EHVVTNPSDW PDGKRAEVYE PVTRCTIIAP
SDYIGAIMEL CQAKRGQLGG MDYLSEDRVE LRYTMPLGEI IFDFFDALKS RTRGYASLDY
EESGEQESEL VKVDILLQGE AVDAFSAIVH KDHAYGYGTR MATKLRELIP RQQFEVPIQA
AVGSRVIARE TIRAIRKDVL AKCYGGDITR KRKLLEKQKE GKKRMKMVGR VEVPQEAFVA
ALSTDDSKEK GKK
|
|---|
| |