| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amir_1082 |
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| Symbol | |
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| ID | 8325256 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Actinosynnema mirum DSM 43827 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013093 |
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| Strand | - |
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| Start bp | 1203152 |
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| End bp | 1204780 |
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| Gene Length | 1629 bp |
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| Protein Length | 542 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 644941628 |
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| Product | delta-1-pyrroline-5-carboxylate dehydrogenase |
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| Protein accession | YP_003098884 |
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| Protein GI | 256375224 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1012] NAD-dependent aldehyde dehydrogenases |
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| TIGRFAM ID | [TIGR01236] delta-1-pyrroline-5-carboxylate dehydrogenase, group 1 |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGGATGCCG TGACCTCAGT GCCCGCCCCG GTCAACGAGC CGGTGCTCGG CTACGCCCCC
GGAACGCCCG AGCGCGCCGA GCTGCAGGCC AAGCTCGCCG AGCTGGCCAA GGAGCCCCTC
GAGCTGACCG CGACCATCGG CGGCGAGCAG CGCGTCGGCG GCGGCGAGCG GTTCGACGTG
GTGCAGCCGC ACAACCACCG CGCGGTGCTG GGCACCCTGC ACGGCGCCAC CCACCAGGAC
ACCCGCGACG CGCTGGAGGC GGCCCGCGCC GCCGCGCCCG CGTGGCGCGC CCTGTCCTTC
GACGACCGCG CGGCGATCCT GCTGCGCGCC GCCGACCTGC TCGCGGGCCC GTGGCGCTCC
ACGCTGAACG CGGCCACCAT GCTGGGCCAG TCCAAGACCG CGATCCAGGC CGAGATCGAC
GCGGCCTGCG AGCTGATCGA CTTCTGGCGC TTCAACGTCC ACTTCGGCCG CCAACTGCTG
GCCGAGCAGC CCCAGTCCAG CCCCGGCGTG TGGAACCGCA CCGACCACCG CCCGCTGGAG
GGCTTCGTCT ACGCGATCAC CCCGTTCAAC TTCACCGCGA TCGCGGGCAA CCTGCCGACC
GCGCCCGCCC TGATGGGCAA CGTGGTGCTG TGGAAGCCCT CGCCCACGCA GAGCTTCGCC
GCGCACCTGA CCATGCGGCT GCTGGAGGAG GCGGGGATGC CTCCGGGCGT GATCAACCTG
CTGCCCGGCG ACGGCCTCGC GGTCTCCGAG GTGGCGCTGG CCGACCCGGA CCTCGCGGGC
ATCCACTTCA CCGGGTCCAC CAGGACCTTC CAGCACCTGT GGGGCCAGGT CGGCGCGAAC
ATCGCCGGGT ACCGCTCGTA CCCGAGGATC GTCGGCGAGA CCGGCGGCAA GGACTTCGTG
CTCGCCCACC CGTCGGCCGA CCCCGAGGTG CTGCGCACGG CGCTGGTGCG CGGCGCGTTC
GAGTTCCAGG GCCAGAAGTG CTCGGCGGCC TCGCGCGCCT ACGTGCCGCG CTCGGTGTGG
AACCGGATCA AGGACGACTT CCTGGCCGAG GTCGAGTCGC TGAAGATGGG CGACGTCACC
GACTTCTCCA ACTTCCTGGG CGCGGTCATC GACCGCCGCT CGTTCGACAA GCTGTCCGGC
GTGCTGGAGG CGGCGCGCTC GGACTCGTCG CTGGAGGTCG CGGCGGGCGG CACGGCCGAC
GACTCCGAGG GCTTCTTCGT GCGCCCGACC GTGCTGCTGG GCTCGGACCC GGAGCACGAC
GTGTTCCGCA CCGAGTACTT CGGCCCGGTG CTGGCCGTGC ACGTGTACGA GGACGGCGAC
TACGACACGG TCCTCAAGCA GATGGAGTCG GTGTCCCCGT ACGGCCTGAC CGGCGCGATC
ATCGCCCGCG ACCGGGCGGC CGTCGCGCAC GCCCAGCAGG TGCTGCGCTT CGCGGCGGGC
AACTTCTACG TCAACGACAA GCCGACCGGC GCGGTCGTCG GCCAGCAGCC GTTCGGCGGC
GGCCGGTCGT CCGGCACCAA CGACAAGGCC GGGTCGGTGC ACAACCTGCT GCGCTGGGTC
AGCCCGCGCT CCATCAAGGA GACCTTCGTG GCCCCGACCT CGGTCGCCTA CCCCCACCAG
GAGGGCTGA
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| Protein sequence | MDAVTSVPAP VNEPVLGYAP GTPERAELQA KLAELAKEPL ELTATIGGEQ RVGGGERFDV
VQPHNHRAVL GTLHGATHQD TRDALEAARA AAPAWRALSF DDRAAILLRA ADLLAGPWRS
TLNAATMLGQ SKTAIQAEID AACELIDFWR FNVHFGRQLL AEQPQSSPGV WNRTDHRPLE
GFVYAITPFN FTAIAGNLPT APALMGNVVL WKPSPTQSFA AHLTMRLLEE AGMPPGVINL
LPGDGLAVSE VALADPDLAG IHFTGSTRTF QHLWGQVGAN IAGYRSYPRI VGETGGKDFV
LAHPSADPEV LRTALVRGAF EFQGQKCSAA SRAYVPRSVW NRIKDDFLAE VESLKMGDVT
DFSNFLGAVI DRRSFDKLSG VLEAARSDSS LEVAAGGTAD DSEGFFVRPT VLLGSDPEHD
VFRTEYFGPV LAVHVYEDGD YDTVLKQMES VSPYGLTGAI IARDRAAVAH AQQVLRFAAG
NFYVNDKPTG AVVGQQPFGG GRSSGTNDKA GSVHNLLRWV SPRSIKETFV APTSVAYPHQ
EG
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