Gene Amir_0961 details

Gene Information

• Locus tag: Amir_0961
• ID: 8325132
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Actinosynnema mirum DSM 43827
• Kingdom: Bacteria
• Replicon accession: NC_013093
• Strand: -
• Start bp: 1073083
• End bp: 1075116
• Gene Length: 2034 bp
• Protein Length: 677 aa
• Translation table: 11
• GC content: 68%
• IMG OID: 644941507
• Product: N-6 DNA methylase
• Protein accession: YP_003098766
• Protein GI: 256375106
• COG category: [V] Defense mechanisms
• COG ID: [COG0286] Type I restriction-modification system methyltransferase subunit

Plasmid Coverage information

• Num covering plasmid clones: 35
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGACCGAGG AAGCCGCAGT CACCGCTGCG GAGATCGCCC GTCTCTCCGG GGTCGGCCGT 
GCCGCAGTCA GCAACTGGCG TCGCCGCCAT GAGGACTTCC CGCAGCCAGC GGGCGGCACC 
GACACCAGCC CCGTGTTCAA GCTCTCCGAG GTGCAGGCCT GGTTGCAGGG ACAGGGAAAG 
CTCAACGCGC TGTCTGGCCG TGAACTCGTC TGGCAGCACT TGGAAGCGGC TTCCGGTACC 
GACTTGATCA GCGATGCACT GGCCGCTGCT GGCACATATC TGGCAAACGG CTCCTCCGGA 
AAGATGTTCG ACGAGAACAC CCGCAACGCT CTCGACGCGC TCGCCTCAGA GGACGGGGCC 
GAAGCCGCCT TCGAGCAGTT GCACGACCGG TTCGTCGAGG CGAACTGGCG AGGTGTGGCA 
GTGACGCCGC GAGAACTCGC CCGGTTGATG GTCGATCTCA CCGAACCTCA CGGCACCGTG 
TTCGACCCAG CGTGCGGCAC CGGAGCACTG CTGCGCGCAG CGGTGCGCTC AGAACCGGGC 
ATTCGACCGG TCGGCCAGGA GCTGGACCCG TCGCTGGCAC AAGTCGCCAT CGCACGACTC 
GCGTTCGCCG CAGGCGAGGC CAGCGTTCGA TCCGGTGATT CGCTGCGGAA CGACGCTTTC 
CCAGAGCTCG TGGCTGACGT CGTCGTGTCG AACCCGCCGT TCAACATCCG CAACTGGGGT 
GCCGAGGAAC TCGCCTACGA CCGTCGCTGG GTCTACGGCG TTCCCCCTAA GGGAGAGTCG 
GAACTGGCCT GGGTCCAGCA CTGCCTCGCT CACCTGAGGC CGGGCGGACA CGCCGTTGTG 
CTCATGCCGC CCGCCGTGGC GTCACGCCGC TCCGGTAGGC CGATCCGCGC CGAACTCCTA 
CGCAGCGGCA CCCTGCGCGC CGTGGTCGCG CTGCCGCCTG GTGCTGCGGC TCCCCTGCAC 
GTCGGCCTGC AGATATGGGT CCTTCGCCGC CCCGAGCCAG GCGGTGCCGA CCGACGGACC 
GTGCTGTTCA TCGACACCGC AGGCGAACAG CACACCCACC CCCCAGAAGC GCACCGGGGT 
TCGACGGGGC GGACGTCACC CCGCGTACAA GCGGGACGGC AAGTTGTGGG GTGGGACACG 
CTGAGCGCGA CCGTCCTGGG CCATTGGCGG GCATTCTCAC CGAACCCGGA ATGTTTCACA 
GATGCCCCCG GCACCACGCG TGCCATCCCT GCGATCGATC TACTCGATGA CCTCGTTGAC 
GTCTCCCCAG CCCGTCACGT CCGGATCTCC GCGTCCACCG CTGACCCGAT CGCGGTCGCG 
AAGCACGCGA ACGAGCTGCG CGACCGGTTG ACGGAGAGTG CTACGACGTT GGCCGCGTCA 
CCCATCCCTG CTGGTTGGCG ACCGGTGGGA GAGGAGTCGC GATCATGGCG CACAGCAACG 
GTCGCCGACT TGTCGCGCGG CGGTGCGCTG ACTCTGCACC GCACCGTTCC TGCTGTGCGC 
GGATCGAAGG AAATCAACCT CCCTGAGGAG CCCGCGAGCC GCCGCGTCCT GACGGGTCGC 
GACGTGGCGA CCGATGCGCG TGCTTCAGCT GGCGCTGATG AGCAGCGCAG CGCGATTTTT 
GTGCTGATCG AGCCGGGTGA CGTCCTGTTG TCCGGCGTGG CGGCCGGCCG AGGAGCCGCG 
GCGCGTGTCG CCGACGGGGA GGACGCTGGA TGCCTGCTCG GACTGCACGT GCACCTCTTC 
CGTCCAGCAC CTGACCGTCT GGACCCCTGG TTCCTGGCTG GGTTCCTGTC CGCTGCCGAC 
AACGTCAGCA GCGCCTCAAC CGGCACCACA GCCGTCCACA TCGATCCCCG AAGGCTGCGC 
GTACCGCTCC TACCGCTGAT CGAGCAGCGC CGCTACGGCG GAGCTTTCCG GCAAATGCAC 
GAGCTTCGCA CCACTGCACG GCAGGTGGCA AAGCTGGCCA CCGAGACAGC TGGCACGCTA 
GCCGCAGGCC TGACCAGTGG CGCACTGGCA CCACCCGACG TTGACTGCCC CTGA 

 

Protein sequence

MTEEAAVTAA EIARLSGVGR AAVSNWRRRH EDFPQPAGGT DTSPVFKLSE VQAWLQGQGK 
LNALSGRELV WQHLEAASGT DLISDALAAA GTYLANGSSG KMFDENTRNA LDALASEDGA 
EAAFEQLHDR FVEANWRGVA VTPRELARLM VDLTEPHGTV FDPACGTGAL LRAAVRSEPG 
IRPVGQELDP SLAQVAIARL AFAAGEASVR SGDSLRNDAF PELVADVVVS NPPFNIRNWG 
AEELAYDRRW VYGVPPKGES ELAWVQHCLA HLRPGGHAVV LMPPAVASRR SGRPIRAELL 
RSGTLRAVVA LPPGAAAPLH VGLQIWVLRR PEPGGADRRT VLFIDTAGEQ HTHPPEAHRG 
STGRTSPRVQ AGRQVVGWDT LSATVLGHWR AFSPNPECFT DAPGTTRAIP AIDLLDDLVD 
VSPARHVRIS ASTADPIAVA KHANELRDRL TESATTLAAS PIPAGWRPVG EESRSWRTAT 
VADLSRGGAL TLHRTVPAVR GSKEINLPEE PASRRVLTGR DVATDARASA GADEQRSAIF 
VLIEPGDVLL SGVAAGRGAA ARVADGEDAG CLLGLHVHLF RPAPDRLDPW FLAGFLSAAD 
NVSSASTGTT AVHIDPRRLR VPLLPLIEQR RYGGAFRQMH ELRTTARQVA KLATETAGTL 
AAGLTSGALA PPDVDCP