Gene Amir_0887 details

Gene Information

• Locus tag: Amir_0887
• ID: 8325051
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Actinosynnema mirum DSM 43827
• Kingdom: Bacteria
• Replicon accession: NC_013093
• Strand: +
• Start bp: 979574
• End bp: 981517
• Gene Length: 1944 bp
• Protein Length: 647 aa
• Translation table: 11
• GC content: 73%
• IMG OID: 644941429
• Product: hypothetical protein
• Protein accession: YP_003098694
• Protein GI: 256375034

Plasmid Coverage information

• Num covering plasmid clones: 22
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGACGCTGC TCTCGCTCGT GGCCGCGCTG TCCGTCGCGC TGTGGGCCTG GCGGCGGAAC 
GCGCGCACCC CTGGACCGGC CGGTCGCGGT CGCTGGCGCG CCATGGCGGT GGTGGTCGCG 
CTGGTCGGCC TGCAGGTCGT GATCGGCGCG CCCGCCGCGA GCGCGGCGAA CTGCGGTGAG 
GCGCCCAACC CGGAGCGGCC CGGCTCCGGC ATGGTCGGCG CGATCGACCC GCCGCTCGGC 
AACGGCCTGC CCGACACGCC GTACGACCGG TACAGCTACG CGGGCATGGT CTGGCACACC 
TACCAGACCA ACTGCACGGT GGTGCCCGAC TCCGGTGCGG TGATCGACAC CTGGATGGGC 
AACGAGCTGT TCAACATCGG CAAGAACATC GTGGGCGCCA CCAACGCGCT GCACTACACG 
GTGATGGGCC GGGGCCTGCT GGTGCCGCTG GACGAGGCGG TCGAGGCGGG CGTGCAGCGC 
GTCTACGACA ACGTCTACCT GCGCTGGTTC GGCCTGGTCG CGCTGGTCCT CGCGGTGCTG 
ATGTTCCGGC AGATCTGGCA GGGCGACCTC GCCGCGATCT CCAAGCGGGG GCTCTGGGCG 
CTGGCCGCCA TGTGGTTGGC GACGTCGACG CTCGCGCTGC CGCAGTTCTA CACGTTCCTC 
GACGGCACGC TCGTCACCAA GACCTCCGAG ATCCAAGCGG GCTTCCTGGA GGCCCCGGAG 
AAGGACGACG CGCTGCACGT CCTGCCGTCC CGGCTGCACG ACGCGGTGGT CTACCAGACC 
TGGCTGCGCG GCGAGTTCGG CACGCCCGAC GCGCCGCAGG CCGCCGAGTT CGGCCCCAGG 
CTGCTGGCCG CGCAGGCGTG GAACCTGGAC GAGATGGCCG AGCAGAAGGA CGGCGACCAG 
GCCGCGCTCG ACGCCAAGAA GAACGACTTC AAGGCGGTCT ACACCGAGCT CGGCCCGACC 
CAGGGCTACT TCTCCGGCGC GGACGGCGGT CGCACCGGCG CGGGGTTCCT GTCGCTGCTC 
CAGGCGGTCG CGTTCTCGCT GTTCCAGCTG TTCGCGAAGG CCGCGGTGCT GCTGGCCCAG 
CTGCTGCTGC GCATCCTCAC CCTCGCCGGT CCGCTGATCG GCCTGGTCGC GCTGCTGCAC 
CACGAGCTGC TGCGCAAGGT CGCCCGCGCC GCCGCCGTGA CCGTGTTCAA CGTGCTGATC 
CTGGCGGTGC TGGCGGGCAC CCACGCCCTG CTGCTCCAGG CGATCTTCAA CGCCTCCGGG 
CTGTCGCTGC TGACCCGCAC CATGCTCGGC CTGATGCTCA CCGTGGTCTG CTTCATGATC 
GGCAAGCCGC TGGGCCGCAT GTGGCAGATG GTCGAGATGT CGGTGGGCAC GGCGGGCAGC 
GCGCTGCCGA TGAAGGGCGG CGTGTTCTCC CGGCTCGGCA AGCGCAAGGA CACCGGCCCG 
ACGCCCCAGG AGGAGTTCTG GGAGACCGTC AGGGACGGCG ACGGCGACGA CGGACCCCAG 
GTCCCGCAGC GCGGCGCCCA GCGGGTGCGC CCCGAGGCGG CCAACCCGGC CGTGGTCAGC 
GCCACCGCCC AGCGGCTCGA CCGCGACGGC TCGGGCGGGT ACGGCTCCTC GGACTACGGC 
TCCTCCGGTT ACGGCTCCTC GGGCTACGGC GGCCAGAACG AGCTGCCGTC CCGCGCGCGG 
CCCGCGCTGG CCCCGTCCGG CGGCCAGGCC GCGCTGCCCG CCGGGCGCGC GTCGCGGGTC 
GTGGACACCC CGCCGGTCGC CGACCGGGGC TGGGACCGGG TCGACGACGC GGTGCTCGTG 
CCGTCCCGGT CGACCACCTA CGCCACGCGC GTGGACCCCG GCCCGATCAG CAACCCGCGC 
GCGGCCGAGA CCGAGGTCGT CGCGGGCAGG CAGGTGCACG TGATCTACCG GCCGTCGCGC 
GGCCTGGAAG TCAGGGATGG CTGA 

 

Protein sequence

MTLLSLVAAL SVALWAWRRN ARTPGPAGRG RWRAMAVVVA LVGLQVVIGA PAASAANCGE 
APNPERPGSG MVGAIDPPLG NGLPDTPYDR YSYAGMVWHT YQTNCTVVPD SGAVIDTWMG 
NELFNIGKNI VGATNALHYT VMGRGLLVPL DEAVEAGVQR VYDNVYLRWF GLVALVLAVL 
MFRQIWQGDL AAISKRGLWA LAAMWLATST LALPQFYTFL DGTLVTKTSE IQAGFLEAPE 
KDDALHVLPS RLHDAVVYQT WLRGEFGTPD APQAAEFGPR LLAAQAWNLD EMAEQKDGDQ 
AALDAKKNDF KAVYTELGPT QGYFSGADGG RTGAGFLSLL QAVAFSLFQL FAKAAVLLAQ 
LLLRILTLAG PLIGLVALLH HELLRKVARA AAVTVFNVLI LAVLAGTHAL LLQAIFNASG 
LSLLTRTMLG LMLTVVCFMI GKPLGRMWQM VEMSVGTAGS ALPMKGGVFS RLGKRKDTGP 
TPQEEFWETV RDGDGDDGPQ VPQRGAQRVR PEAANPAVVS ATAQRLDRDG SGGYGSSDYG 
SSGYGSSGYG GQNELPSRAR PALAPSGGQA ALPAGRASRV VDTPPVADRG WDRVDDAVLV 
PSRSTTYATR VDPGPISNPR AAETEVVAGR QVHVIYRPSR GLEVRDG