Gene Amir_0861 details

Gene Information

• Locus tag: Amir_0861
• ID: 8325024
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Actinosynnema mirum DSM 43827
• Kingdom: Bacteria
• Replicon accession: NC_013093
• Strand: -
• Start bp: 948618
• End bp: 949157
• Gene Length: 540 bp
• Protein Length: 179 aa
• Translation table: 11
• GC content: 79%
• IMG OID: 644941403
• Product: protein of unknown function DUF1470
• Protein accession: YP_003098668
• Protein GI: 256375008
• COG category: [R] General function prediction only
• COG ID: [COG5516] Conserved protein containing a Zn-ribbon-like motif, possibly RNA-binding

Plasmid Coverage information

• Num covering plasmid clones: 11
• Plasmid unclonability p-value: 0.0214303
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGGACGGGG TGGACGGGGA GGCGCTGCTG CTGTCGCTGC TCAACAGCAC GCCGGTGGCC 
GCGGGGCGGC CGACCGACGA GCTGGGCGAC GACGGGCGCG CGGGGCCGTG GTTCGCGGCC 
AACGGGGTGC CGGACGGGCC GGAGGACCGG CGTCGGGTGC GGCGGGCGCG CGACCTGCTC 
CAGGCCGTGG TGCGCGGCGA CGAGCCGCCG GGCGCGCTCG GGCCGCTGCT GGACGGGGTG 
GTGTCGCGGG CGTCGGTCGA CGACTCGGGG GTCACCTGGG CGGTCGACGC GGAGGGCGCG 
CGGGGCGCGG TCGTGGCGGC GGTGCTGGCC TGGGACGCGG TGCGGCGGGG GCGGCCGGGG 
CGGTTGCGGG CGTGCGCGAA CGACGAGTGC GCGCGGTTCC TGCTGGATCG GAGCAAGTCC 
AACAACGCCC GGTGGTGCTC GATGGCGGCG TGCGGGAACA AGCTCAAGGC CCGGCGGCAC 
TACCGGCGGG TGCGCGAGGG TGCGGGCGGG GGCGAGGGTG CGGGCGGGGG CGCGGACTAG 

 

Protein sequence

MDGVDGEALL LSLLNSTPVA AGRPTDELGD DGRAGPWFAA NGVPDGPEDR RRVRRARDLL 
QAVVRGDEPP GALGPLLDGV VSRASVDDSG VTWAVDAEGA RGAVVAAVLA WDAVRRGRPG 
RLRACANDEC ARFLLDRSKS NNARWCSMAA CGNKLKARRH YRRVREGAGG GEGAGGGAD