Gene Amir_0857 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmir_0857 
Symbol 
ID8325020 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameActinosynnema mirum DSM 43827 
KingdomBacteria 
Replicon accessionNC_013093 
Strand
Start bp943891 
End bp944799 
Gene Length909 bp 
Protein Length302 aa 
Translation table11 
GC content77% 
IMG OID644941399 
Productprotein of unknown function zinc metallopeptidase putative 
Protein accessionYP_003098664 
Protein GI256375004 
COG category[R] General function prediction only 
COG ID[COG2321] Predicted metalloprotease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.18507 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGACACGC CCGAGCGGCG GGGCGGCAAC CCCTTGGCAG TGGTCTCGGT GTTCGCGGTG 
GTCGTCGCGG GCGTCCTGGG CCTGGCGGTG GTCCCCCGGC TGGGGCTGAC CAGGCCGGTG
GAGGGGCGCG CGGTGGCCGC CGCCCCGATC GAGGCCGATC CGGCGTCGGG CGAGCCCGAG
GGGAACCGGC CCCGGTCGGT CTACCGGCTG GGCGACCACC CGCTGCTGAC CTCGGACCGC
AGGCTCGGGC AGGTGACCTG CGAGCTCCCC GCGTTCGGGA CCGGCGACGA GCAGTTGGCC
GCGTTCTACC GGGAGGGCGT GGTGTGCCTG GACCGGGCCT GGGAGCCGGT GCTCGCGGAG
GCCGGGCTGC CGTTCGCCAC GCCCGAGCTG AACACCGGGC CGGAGCTGGA GGACGGGCCC
TGCGGGGCCG CGCCCTCGGC GGACGAGGCC GTCGCCTACT ACTGCGGGAG CAACCGGACG
GTGTACATGC CGACCGCGCG CCTGCGGGCC CCCGGCGGGG GCGAGGACCG GGCGTCCTCG
CACCTGGCGA CGTTGGCGCA CGAGTACGGG CACCACGTGC AGGCGCTGGC CGGGATGCTG
CGGGCCGGGA ACCGGCGGAT CGCCGAGGCG GGCGAGACCG ACCCGGCCGG GCTGGAGATG
TCCCGGCGGC TGGAGCTCCA GGCCAACTGC TTCGCGGGCA TGTTCCTGGC CTCGGCCTCC
GGGCGCGGGT CGGTCGACCG GGTGATGGCC GAGGAGGCCG TGGCGGACTT CCGGTACGCG
GTCGTCGAGC CGCCCGAGCG CAACGGCCAC GGCAGCCCGG CCAACCAGGA CACCTGGGCC
CGCGCCGGCT TCGGCGGCGG GACCTCGGCC TGCAACACGT TCACGGCGGA CGCCGGGGCG
GTCGGCTGA
 
Protein sequence
MDTPERRGGN PLAVVSVFAV VVAGVLGLAV VPRLGLTRPV EGRAVAAAPI EADPASGEPE 
GNRPRSVYRL GDHPLLTSDR RLGQVTCELP AFGTGDEQLA AFYREGVVCL DRAWEPVLAE
AGLPFATPEL NTGPELEDGP CGAAPSADEA VAYYCGSNRT VYMPTARLRA PGGGEDRASS
HLATLAHEYG HHVQALAGML RAGNRRIAEA GETDPAGLEM SRRLELQANC FAGMFLASAS
GRGSVDRVMA EEAVADFRYA VVEPPERNGH GSPANQDTWA RAGFGGGTSA CNTFTADAGA
VG