Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Amir_0857 |
Symbol | |
ID | 8325020 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Actinosynnema mirum DSM 43827 |
Kingdom | Bacteria |
Replicon accession | NC_013093 |
Strand | - |
Start bp | 943891 |
End bp | 944799 |
Gene Length | 909 bp |
Protein Length | 302 aa |
Translation table | 11 |
GC content | 77% |
IMG OID | 644941399 |
Product | protein of unknown function zinc metallopeptidase putative |
Protein accession | YP_003098664 |
Protein GI | 256375004 |
COG category | [R] General function prediction only |
COG ID | [COG2321] Predicted metalloprotease |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.18507 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGGACACGC CCGAGCGGCG GGGCGGCAAC CCCTTGGCAG TGGTCTCGGT GTTCGCGGTG GTCGTCGCGG GCGTCCTGGG CCTGGCGGTG GTCCCCCGGC TGGGGCTGAC CAGGCCGGTG GAGGGGCGCG CGGTGGCCGC CGCCCCGATC GAGGCCGATC CGGCGTCGGG CGAGCCCGAG GGGAACCGGC CCCGGTCGGT CTACCGGCTG GGCGACCACC CGCTGCTGAC CTCGGACCGC AGGCTCGGGC AGGTGACCTG CGAGCTCCCC GCGTTCGGGA CCGGCGACGA GCAGTTGGCC GCGTTCTACC GGGAGGGCGT GGTGTGCCTG GACCGGGCCT GGGAGCCGGT GCTCGCGGAG GCCGGGCTGC CGTTCGCCAC GCCCGAGCTG AACACCGGGC CGGAGCTGGA GGACGGGCCC TGCGGGGCCG CGCCCTCGGC GGACGAGGCC GTCGCCTACT ACTGCGGGAG CAACCGGACG GTGTACATGC CGACCGCGCG CCTGCGGGCC CCCGGCGGGG GCGAGGACCG GGCGTCCTCG CACCTGGCGA CGTTGGCGCA CGAGTACGGG CACCACGTGC AGGCGCTGGC CGGGATGCTG CGGGCCGGGA ACCGGCGGAT CGCCGAGGCG GGCGAGACCG ACCCGGCCGG GCTGGAGATG TCCCGGCGGC TGGAGCTCCA GGCCAACTGC TTCGCGGGCA TGTTCCTGGC CTCGGCCTCC GGGCGCGGGT CGGTCGACCG GGTGATGGCC GAGGAGGCCG TGGCGGACTT CCGGTACGCG GTCGTCGAGC CGCCCGAGCG CAACGGCCAC GGCAGCCCGG CCAACCAGGA CACCTGGGCC CGCGCCGGCT TCGGCGGCGG GACCTCGGCC TGCAACACGT TCACGGCGGA CGCCGGGGCG GTCGGCTGA
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Protein sequence | MDTPERRGGN PLAVVSVFAV VVAGVLGLAV VPRLGLTRPV EGRAVAAAPI EADPASGEPE GNRPRSVYRL GDHPLLTSDR RLGQVTCELP AFGTGDEQLA AFYREGVVCL DRAWEPVLAE AGLPFATPEL NTGPELEDGP CGAAPSADEA VAYYCGSNRT VYMPTARLRA PGGGEDRASS HLATLAHEYG HHVQALAGML RAGNRRIAEA GETDPAGLEM SRRLELQANC FAGMFLASAS GRGSVDRVMA EEAVADFRYA VVEPPERNGH GSPANQDTWA RAGFGGGTSA CNTFTADAGA VG
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