| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amir_0851 |
|---|
| Symbol | |
|---|
| ID | 8325014 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Actinosynnema mirum DSM 43827 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013093 |
|---|
| Strand | - |
|---|
| Start bp | 933357 |
|---|
| End bp | 937406 |
|---|
| Gene Length | 4050 bp |
|---|
| Protein Length | 1349 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 77% |
|---|
| IMG OID | 644941393 |
|---|
| Product | UvrD/REP helicase |
|---|
| Protein accession | YP_003098658 |
|---|
| Protein GI | 256374998 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG0210] Superfamily I DNA and RNA helicases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCCCCACG TGGTTGCGGC GGGTGGTGTC CAGCGGGGTG GTGCGGTTCC GCACGCGTCG
CCCGCCGACA TCGCCGACGC CCTCGGGCTG CACCCGCCGA CGCCCGAGCA GGCCGCCGTC
ATCGCCTCGC CCGCCGCCCC CGCGCTGGTC GTGGCGGGCG CGGGCGCGGG CAAGACCGAG
ACCATGGCCG CGCGCGTCGT CTACCTGGTC GCGAACGGCG TCGTCACGCC CGACCGGGTC
CTCGGCCTCA CGTTCACCCG CAAGGCCGCC CGGCAGCTCG GCGAGCGGGT GCGCGGTCGG
CTGCGCCGCC TGGCCGGGTC GCCGCTGCTG GACGAGCTGG ACCCGTCCGG CCGCCGCCGC
GCCGCCGTGC TCACCACCGA GCCGGTCGTG CTCACCTACC ACGCCTACGC GGGCCGCCTG
GTCGGCGAGC ACGGGCTGCG GCTGCCCGTG GAGCCCGGCG TGCGGCTGCT CACCGAGACC
GCGGCGTGGC AGCTCGCGCA CCGCGTGGTG TCGGCGTGGA CCCAGGACCT CGACACCGAC
AAGATCCCCA CCACGATCAC CTCCTACCTG CTCTCCCTCG CCGGCGAGCT GGGCGAGCAC
CTGGTCGAGC CCGAGCAGCT CCTCGCGCAC GCCGAGCACC TGTGCGCGCT GATCGAGCAC
GCCCCCAAGG CCCCCAGGCA GAAGGACGCC CTGCCGGAGA AGCTCCAGGA GATCGTGGAC
GCCCAGCGCC TGCGCGTCGC CCTGCTGCCG CTGCTCGACG CCTACCGGGC CCGCAAGCGC
CGCGACGCCG TCCTGGACTT CGCCGACCAG ATGAGCCTCG CCGCCCGCCT GGCCACCGGG
CACCCGGAGG TCGTCGAGGG CGAGCGCGAG CGCTACGGCG CCGTGCTGCT CGACGAGTAC
CAGGACACCG GCCACGCCCA GCGCGTGCTG CTGCGCGCCC TGTTCGGCGA CGGGGACCCG
ATGCCGGTCA CCTCGGTCGG CGACCCCGCC CAGGCCATCT ACGGCTGGCG CGGCGCGAGC
GCGGCCAACC TGCCCCGGTT CCGCGAGGAC TTCCCGCCCG CCGACAAGTA CGAGCTGCTC
ACCAGCTTCC GCAACCCGCC CGAGGTGCTG CACCTGGCGA ACGCCGTGTC CGGTCCGCTG
CGCGCGGCGG GCCTGGACGT CGCGCCGCTG CGGCACCGCG AGGGCGTCGA GCCGGGCGAC
GTGCGGATCG GCCTGTTCCC CGACGTGCGC GCCGAGCTGG AGTGGCTGGC GGACACCGTC
GCCGAGCAGT GGCGCGCCCA CGTGGACACC AGCGACGAGC CGCCGACCGC GGCCGTGCTG
GTGCGCCGCC GCTCCGACAT GCCCGCGATC GCCGCCGTGC TGCGCGACCG GGGGCTGCCG
GTGGAGGTCG TCGGCCTCGG CGGGCTGCTG GACGAGCCGG AGGTGCGCGA CCTGACCAGC
GCCCTGCGCG TCCTGGTCGA CCCGCTCGCG GGCACCGCCG CCACCCGGCT GCTCACCGGT
TCCCGCTGGC GGATCGCCGC CTTCGACCTG GCCGCGATGT GGCAGCGCGC CCGCGACCTG
GCGGGGGCGC CCGCGCGCAA GTCCCCCGAC GAGGACCCGC TGTCCGTGCT GGCCGACGCG
CTGCCCGGCG AGCACTCCGA GCAGGCCGGG CTCGCGGACG CGCTCGACGA CCCCGGCGAC
CCGTCCGCCT ACTCGGCCGA GGGCTACCGG CGCATCCGGC GGCTGGGCGC GGAGCTGGCC
GCGCTGCGCA GGCGGTTGAC CCAGCCGCTG CCGGAGCTGG TCGCCGACGT CGAGCGGACC
CTGCTGCTGG ACATCGAGGC GGTCGCCCGG CCGGGCGGGG TGGGGCGGGC GCACCTGGAC
GCGTTCGCGG ACGTGGTGTC GGACTTCGCG GCGGCCAGCC CGGCGGCGAC CCTGCCCGCG
CTGCTGGACT ACCTGCGCAC CGCCGAGCAC GCCGAGGACG GCCTGGCGCC CGGCGAGGTC
GAGGTGGTGG ACAACCGGGT GCAGCTGGTG ACGATGCACT CGGCCAAGGG CCTGGAGTGG
CGGATCGTCG CCGTGCCGCA CGTGGTGAAG GACGTCTTCC CCGGACGGCG GAAGTCGGCG
TCGTGGCTGA AGTCGGTGAC CGAGCTGCCC GCCGCGCTGC GCGGCGACGC CCAGGACCTG
CCGGAGCTGC GGGTGCCGGG CGGGGCGAAC CGCAAGGAGG TCGAGGAGGC GCTCGACCGG
CACGCGGACG AGTTCGAGGA GCGGCGGCTG GTCGAGGAGC GGCGGCTGCT GTACGTGGCG
CTGACCAGGT CCGAGCACAG CCTGCTGGTG TCGGGCCACT GGTGGGGCGA GACGGGCGCG
ACCCCGAAGG GCCCGTCGGC GTTCCTGACC GAGCTGCGCG AGGTCGTGAC GACCGCCGAG
CACCCGCCCG CCGACGTGGC CCACTGGGCG CCCGCGCCGG GGCCGGAGGA CGAGAACCCC
CTCGCGGCGA AGGCGAAGAC GGCCCAGTGG CCCGCCGACC CGCTGGGCTC GCGCCGCGAC
GCGGTGTCCG CGGGGGCGGC CATGGTCGTC GCCGCGCTGG ACCGGCTGCG CGAGGCCGCG
GAGCACGAAC CGCCCGGCGA GCCCGACGAG CCCGACGAGC CCGCCGTGAC CGCCGCCGAG
GCCGGGACGG CCGACGCGGG CGAGGAGTGG GTGCCCCCGG ACGACGAGTG GCTGCCCTCG
GACGAGGAGG AGCCCCCACC ACCACCGGAG GGACCGGACG GCGACTGGGC GGAGTGGACG
ACCCCCGACG AGCCCTGGGA CGACGGCACG CCCCCGGACG CCTCGGAGGC GGCGGCAACC
GCCCCCGAGC ACGGGCCCGA GGTCGAACTC CGGTCAAGCG CACCCGCCGC CGATCCCACA
TCCGAGTCCG GGCCTGAAGC CGGACTCGAA TCCGAATCCG AGCCCGAGCC CGAGCCCGAG
CCCGAGCCCG AGCAAGGATC GGCGCCCACG CACGGGTCCG AGCCGGGGAC CGGCCCTGAG
ACCGTGATCG ACTCCGAGTC CGCGCCCCAT CCGGGCGCCG GGGCGGTGTC GGCCGCCCGG
CTGAGCGCGG GCGGCGGGGT CTCCGCCACG CTGCCCGACA CCGACACCGA CACCGACACC
GCCATCGACG CCGCCCTCGC CGCTACCCCT CTGGGGTTCG CTCCCGAGGG TGATTCGGTG
TCCCCCGAAG GGGCGGATCT CCCCGAGGGG TCCCCCGCCG CCGATCCCAT CCCCGCCGCA
CCCGTCGTTC CCGCCGCCGA CCTCGTCCCC GCCGACCCCG TCCCCGCCGA ACCCGTCCTC
CCCACCGACC CCGAGATCGT CCTCCCCACC GATCCCGAGA TCAGCGACCC CGACGCCGCC
GATCCCGAGG GCTGGGCGCG GGACGTCGAC GTGCTGCTCG CCGAGCGGGC CGCCGCCATG
GACCGCCGCG AGCGCGTCCT GCTGCCCGAG CACCTGTCGG TCAGCCAGCT CGTCGAGCTG
GCCACCGACC CCGACCAGCT GGCCCGCCGC CTGCGCCGCC CGCTGCCGTT CCCGCCGAAC
CCGCTGGCCC GTCGTGGCAC CGCGTTCCAC ACCTGGCTGG AGCGGCGGTT CGGGGCGGTT
CGGCTGCTGG AGCTGGACGA GCTGCCCGGC GCCGCCGACG AGGACGCCGT GCCGGACGGG
GAGCTGGGGC GGCTGCAGGA GGCGTTCCTC GCCAGCGCCT GGGCCGACCG CACGCCGCAC
GCCGTCGAGG TGCCCTTCGA GGCCGAGGTG GACGGGCTCG CGGTGCGCGG GCGGATGGAC
GCCGTGTTCG CCGACCCGGA CGGCGGGTGG ACCGTCGTGG ACTGGAAGAC CGGCCGGGTG
CCCGAGGCCG ACCGGGTTCC GTCGCTGTCC GTGCAGCTCG CGGCGTACCG GCTGGCCTGG
GCGTCGCTGT CGGGCAGCCC GGTGGAGCTG GTCAGGGCCG CCTTCCACTA CGTCCGCGAC
GACCGCACGC TCCGCCCCGC CGACCTGCTC GACGCCGAGG GTCTGCGCGC CCTCATCCGG
ACGGTGCCCG ATCTCCGCCC GAAGGAGTGA
|
|---|
| Protein sequence | MPHVVAAGGV QRGGAVPHAS PADIADALGL HPPTPEQAAV IASPAAPALV VAGAGAGKTE
TMAARVVYLV ANGVVTPDRV LGLTFTRKAA RQLGERVRGR LRRLAGSPLL DELDPSGRRR
AAVLTTEPVV LTYHAYAGRL VGEHGLRLPV EPGVRLLTET AAWQLAHRVV SAWTQDLDTD
KIPTTITSYL LSLAGELGEH LVEPEQLLAH AEHLCALIEH APKAPRQKDA LPEKLQEIVD
AQRLRVALLP LLDAYRARKR RDAVLDFADQ MSLAARLATG HPEVVEGERE RYGAVLLDEY
QDTGHAQRVL LRALFGDGDP MPVTSVGDPA QAIYGWRGAS AANLPRFRED FPPADKYELL
TSFRNPPEVL HLANAVSGPL RAAGLDVAPL RHREGVEPGD VRIGLFPDVR AELEWLADTV
AEQWRAHVDT SDEPPTAAVL VRRRSDMPAI AAVLRDRGLP VEVVGLGGLL DEPEVRDLTS
ALRVLVDPLA GTAATRLLTG SRWRIAAFDL AAMWQRARDL AGAPARKSPD EDPLSVLADA
LPGEHSEQAG LADALDDPGD PSAYSAEGYR RIRRLGAELA ALRRRLTQPL PELVADVERT
LLLDIEAVAR PGGVGRAHLD AFADVVSDFA AASPAATLPA LLDYLRTAEH AEDGLAPGEV
EVVDNRVQLV TMHSAKGLEW RIVAVPHVVK DVFPGRRKSA SWLKSVTELP AALRGDAQDL
PELRVPGGAN RKEVEEALDR HADEFEERRL VEERRLLYVA LTRSEHSLLV SGHWWGETGA
TPKGPSAFLT ELREVVTTAE HPPADVAHWA PAPGPEDENP LAAKAKTAQW PADPLGSRRD
AVSAGAAMVV AALDRLREAA EHEPPGEPDE PDEPAVTAAE AGTADAGEEW VPPDDEWLPS
DEEEPPPPPE GPDGDWAEWT TPDEPWDDGT PPDASEAAAT APEHGPEVEL RSSAPAADPT
SESGPEAGLE SESEPEPEPE PEPEQGSAPT HGSEPGTGPE TVIDSESAPH PGAGAVSAAR
LSAGGGVSAT LPDTDTDTDT AIDAALAATP LGFAPEGDSV SPEGADLPEG SPAADPIPAA
PVVPAADLVP ADPVPAEPVL PTDPEIVLPT DPEISDPDAA DPEGWARDVD VLLAERAAAM
DRRERVLLPE HLSVSQLVEL ATDPDQLARR LRRPLPFPPN PLARRGTAFH TWLERRFGAV
RLLELDELPG AADEDAVPDG ELGRLQEAFL ASAWADRTPH AVEVPFEAEV DGLAVRGRMD
AVFADPDGGW TVVDWKTGRV PEADRVPSLS VQLAAYRLAW ASLSGSPVEL VRAAFHYVRD
DRTLRPADLL DAEGLRALIR TVPDLRPKE
|
|---|
| |