| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amir_0838 |
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| Symbol | |
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| ID | 8325001 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Actinosynnema mirum DSM 43827 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013093 |
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| Strand | + |
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| Start bp | 920982 |
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| End bp | 923486 |
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| Gene Length | 2505 bp |
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| Protein Length | 834 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 644941380 |
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| Product | nitrite reductase (NAD(P)H), large subunit |
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| Protein accession | YP_003098645 |
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| Protein GI | 256374985 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1251] NAD(P)H-nitrite reductase |
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| TIGRFAM ID | [TIGR02374] nitrite reductase [NAD(P)H], large subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.000152863 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACGCGGA CGCTTCTGGT CGTCGGTCAC GGCATGGTCG GTCACCGCCT GGTCCAGGCG
GTGCGGGAAA GGGACGTCGA CGGGGCCTGG CGCGTGGTGG TCCTGGCCGA GGAGCCCAGG
GCCGCGTACG ACCGGGTCGC GCTCTCCAGC TACGTCGACA CCTGGGACGC GAGCGGCCTC
GCGCTGGAGC CGCACGACGA CGCGGTGGAG CTGCGCCTCG GCGAGTCGGT CACCGGGGTC
GACCGCGCCG CCAAGCGCGT GCGCACCTCC ACCGGTGCCG AGCTGGCCTA CGACGCGCTC
GTGCTGGCCA CCGGGTCCAG CCCGTTCGTG CCGCCCGTCC CCGGCCGGGA CCTGCCCGGC
TGCCACGTCT ACCGCACCAT CGACGACCTG GACGCGATCC GGGCGACCGT CGACGCGGCG
CGCCTGCGCG GAGCCGGGCA GCGGGGCATG GGCCGCCGCG CGGGCATGGT CCTCGGCGGC
GGGCTGCTCG GCCTGGAGGC CGCGAACGCC CTGCGCGGCA TGGGGATCTC CCCGCACGTG
GTCGAGCTGG GCCCGCGCCT GATGCCGCTG CAGATCGACG AGGGCGGCGG CGCGCTGCTC
AAGCGCATGG TGGAGAAGCT CGGCCTGACC GTCCACACGG GAGTCTCGGC CACCGCCGTC
ACCCGCGACG GCGACCGGCT CGCCGCCACC CTGTCCGACG GCCGCGAGCT GGACCTGGAC
GTCGTGGTGT TCTCGGCGGG CATCCGGCCC CGCGACGAGC TGGCCCGCGC GGCCGGGCTC
GACGTCGGAC CGCGCGGCGG CGTCGTCGTG GACGGCGGCT GCCGCACCTC CGACCCGGAC
GTCTACGCCA TCGGCGAGTG CGCGCTCGTC GGCGGCGTGG TGTACGGGCT GGTCGCCCCC
GGCTACGCCA TGGCGGAGGT GGTCGCGGAC CGGCTCCTCG GCGGCGCGGC CGAGTTCCCC
GGCGCGGACA CCTCCACCAA GCTCAAGCTC CTCGGCGTCG ACGTCGCCTC GTTCGGCGAC
GCGCACGCCA CCTCGCCCGG CGCGCTGGAG GTCGTGGTCA ACGACGCCGT CGCCGGGACC
TACGCCAAGG TCGTCGTGTC CGACGACGCC AGGACCCTCC TCGGCGGCGT GCTCGTCGGC
GACGCCTCCA AGTACCCGGC GCTGCGCCCG CTCGTCGGCC GCCCGGTGCC CGGCGACCCG
GTGTCCCTCA TCGGCGCGGC GGCGGCCGAG CTGGCGCTGC CCGCCGACGC GCAGGTGTGC
TCCTGCCACG CGGTCACCAA GCAGCAGGTC ACCGACGCGA TCACCAGCGG GCGGGCCGTG
GACGTGCCGG GCATCAAGGC GTGCACCAAG GCGGGCACCG GGTGCGGGTC GTGCGTGCCG
ATGCTGAAGA AGCTGCTGGC GGAGTGCGGG GTCGAGCAGT CCCGCGCGCT GTGCGAGCAC
TTCCCGCAGT CCCGCGCCGA GCTGTTCGAG ATCGTCCGCT CCACGGGTGT CGGCACGTTC
AGCGAGCTGG TCGCCCGGTA CGGCAGCGGG CGGGGGTGCG ACCTGTGCAA GCCCGCGGTG
GCGTCGATCC TGGCGTCGCT GGAGAACGGG CACATCCTGG GCGGCGAGCA GGTCACGCTC
CAGGACACCA ACGACCGGTT CCTGGCCAAC ATCCAGCGCA ACGGCACCTA CTCGGTGGTG
CCGCGCATCC CCGGCGGCGA GATCACGCCG GAGAAGCTGA TCGTGATCGG CGAGGTGGCC
CGCGACTACG GGCTCTACAC GAAGATCACC GGCGGGCAGC GGATCGACCT GTTCGGGGCG
ACCGTGGACC AGCTGCCGCT CATCTGGCGG CGGCTGGTGG ACGCCGGGTT CGAGTCCGGG
CACGCCTACG GCAAGTCGCT GCGCACGGTG AAGTCGTGCG TCGGGTCGAC GTGGTGCCGC
TTCGGCGTGC AGGACTCGGT GGGGCTCGCC ATCGAGCTGG AGCTGCGCTA CCGGGGGCTG
CGGTCGCCGC ACAAGTTCAA GTCGGCGGTG TCCGGGTGCG CGCGCGAGTG CGCGGAGGCG
CGCGGCAAGG ACTTCGGGGT CATCGCGACG GAGAACGGGT GGAACCTGTA CGTCGGCGGC
AACGGCGGGT TCACGCCCCG GCACGCTGAT CTTCTGGTGT CCGACGTGGA CACCGGGATG
CTGATCAGGA TCATCGACCG GTTCCTGATG TTCTACATCC GCACGGCCGA CAAGCTGCAG
CGCACCGCGC CGTGGATCGA GTCCATGGAG GGCGGGCTCG ACCACCTGCG CGACGTGGTC
GTGCACGACA GCCTCGGCAT CTGCGCGGAC CTGGAAGCGG CGATGGCCAA GCACGTCGAC
TCCTACGCCG ACGAGTGGCG GGGAGTGCTG GACGACCCGG AGAAGCTGGC GCGGTTCACG
TCGTTCGTGA ACGCGCCGGG AGCGCCGGAC CCCACGATCT CCTTCCGCGA GGAGCGGGGC
CAGCGCGTGC CGGTCGTGCT CGGAATCCCG GAGGTGGCCC GATGA
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| Protein sequence | MTRTLLVVGH GMVGHRLVQA VRERDVDGAW RVVVLAEEPR AAYDRVALSS YVDTWDASGL
ALEPHDDAVE LRLGESVTGV DRAAKRVRTS TGAELAYDAL VLATGSSPFV PPVPGRDLPG
CHVYRTIDDL DAIRATVDAA RLRGAGQRGM GRRAGMVLGG GLLGLEAANA LRGMGISPHV
VELGPRLMPL QIDEGGGALL KRMVEKLGLT VHTGVSATAV TRDGDRLAAT LSDGRELDLD
VVVFSAGIRP RDELARAAGL DVGPRGGVVV DGGCRTSDPD VYAIGECALV GGVVYGLVAP
GYAMAEVVAD RLLGGAAEFP GADTSTKLKL LGVDVASFGD AHATSPGALE VVVNDAVAGT
YAKVVVSDDA RTLLGGVLVG DASKYPALRP LVGRPVPGDP VSLIGAAAAE LALPADAQVC
SCHAVTKQQV TDAITSGRAV DVPGIKACTK AGTGCGSCVP MLKKLLAECG VEQSRALCEH
FPQSRAELFE IVRSTGVGTF SELVARYGSG RGCDLCKPAV ASILASLENG HILGGEQVTL
QDTNDRFLAN IQRNGTYSVV PRIPGGEITP EKLIVIGEVA RDYGLYTKIT GGQRIDLFGA
TVDQLPLIWR RLVDAGFESG HAYGKSLRTV KSCVGSTWCR FGVQDSVGLA IELELRYRGL
RSPHKFKSAV SGCARECAEA RGKDFGVIAT ENGWNLYVGG NGGFTPRHAD LLVSDVDTGM
LIRIIDRFLM FYIRTADKLQ RTAPWIESME GGLDHLRDVV VHDSLGICAD LEAAMAKHVD
SYADEWRGVL DDPEKLARFT SFVNAPGAPD PTISFREERG QRVPVVLGIP EVAR
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