| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amir_0824 |
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| Symbol | |
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| ID | 8324987 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Actinosynnema mirum DSM 43827 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013093 |
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| Strand | - |
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| Start bp | 904032 |
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| End bp | 905861 |
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| Gene Length | 1830 bp |
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| Protein Length | 609 aa |
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| Translation table | 11 |
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| GC content | 74% |
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| IMG OID | 644941366 |
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| Product | DEAD/DEAH box helicase domain protein |
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| Protein accession | YP_003098631 |
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| Protein GI | 256374971 |
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| COG category | [J] Translation, ribosomal structure and biogenesis
[K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG0513] Superfamily II DNA and RNA helicases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.920736 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGCGCGCTG GTACGAGAGA GGCGATCATC CTGACCGCGA CGAACGAGGA CACGCACGTG
GACCCGGTTG AGCTGGAGCA CAGCGAGGCG GGCCTGCCCG AGACCGACGA CTCCCGCCCG
CTGGAGGCCA ACGCGCCGGT GCAGCCGGAG GCGCCGACGT TCACCGAGCT GGGCGTGCGC
GAGGAGATAG TCCGCGCGCT GGGCGAGGCG GGCATCGAGC GCGCCTTCGC CATCCAGGAG
CTGACGCTGC CGCTGGCGCT GGCGGGCGAG GACGTGATCG GCCAGGCCCG CACCGGCACC
GGCAAGACGC TGGGCTTCGG CATCCCGCTG CTCCAGCGGG TGATCACGCC CGGCGACGGG
ACCCCGCAGG CCCTGGTGGT CGTGCCCACC CGCGAGCTGT GCCTCCAGGT GACGCACGAC
CTGACCGACG CGTCCAAGCA CATGGACGTC CGGGTGCTGG CGATCTACGG CGGCAGGCCG
TACGAGCCGC AGATCGCCGC GCTGCGCAAG GGCGTGGACG TGGTGGTCGG CACGCCCGGC
CGCCTGCTGG ACCTGGCCGA GCAGCGCCAC CTGGTGCTGG GCAAGGTCCG CAGCCTGGTG
CTGGACGAGG CCGACGAGAT GCTCGACCTG GGCTTCCTGC CCGACATCGA GCGGGTGCTG
CGGATGGTTC CCGACGAGCG GCAGACCATG CTGTTCTCGG CGACCATGCC GGGGCCGATC
ATCACGCTGG CCAGGACGTT CCTGAACCAG CCGACGCACG TGCGCGCCGA GGAGAACGAC
GCGGGCGCGG TGCACGAGCG CACCGAGCAG TTCATCTACC GGGCGCACGC GCTGGACAAG
GTGGAGCTGC TGGCCCGCGT GCTCCAGGCG CGCGACCGCG GCCTGTCGAT GATCTTCACG
CGGACCAAGC GGACCGCGCA GAAGGTCGCC GACGACATGG CCGAGCGCGG GTTCGCGGTG
GCCGCCGTGC ACGGCGACCT GGGCCAGGGC GCGCGCGAGC AGGCGCTGCG GGCGTTCCGC
TCCGGCAAGA TCGACGTGCT GGTCGCGACG GACGTGGCCG CGCGCGGCAT CGACGTCGAG
GGCGTCACGC ACGTGGTCAA CTACCAGTGC CCCGAGGACG AGAAGACCTA CGTGCACCGC
ATCGGCCGCA CCGGCCGCGC GGGCCGCACG GGCGTCGCGG TGACCCTGGT GGACTGGGAC
GAGATCCCGC GCTGGCAGAT GATCAGCGAC GCCCTGAACC TGGGCAAGCG CGACCCGGTG
GAGACCTACT CGACCTCGGA CCACCTGTTC GCCGAGCTGG GCATCCCGGC CGGGTCGACC
GGCAGGCTGC CGCTGGGGCT GCGCACCCGC GCGGGCCTGG ACGCGGAGCC CGAGGAGAAC
CTGAAGGGCG ACAAGAAGCC CGCGAAGAGC CGTCGCCGCA CCGGTCGCAC CGGGCGCGCC
GGTTCGGGCG AGGGCGAGGC CGCGTCGAGC GCCCCGCAGC AGGGCGGGCA GGCCGGGCAG
GCGGGCGAGT CGGGCGAGGA GAAGTCGACC AGGCCGAGGC GCAGGCGCCG CAGCCGGGGC
GGCGTGTCCT CGGGCGAGGC GGCCGGTGAC GGGGCGGGCG GCGAGTCCGT GTCGGCGTCG
GCATCGGCGT CGGCGTCCGC GTCGACGTCC GCGGCGACGT CCGCGGCGGC GTCCGCGCAG
GTCGGCGGCG GTGAGTCCGG GTCGGGGACC GGTCAGGCGC AGGAGCCGAA GGCTGAGGCG
TCCGGTGACG CCAAGCCGCG CAGGCGCAGG CGTCGCCGTC CTTCCGGGGA GGCCGGTGCT
ACCACCGAGA CGGCTCCCTC GGCAGACTGA
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| Protein sequence | MRAGTREAII LTATNEDTHV DPVELEHSEA GLPETDDSRP LEANAPVQPE APTFTELGVR
EEIVRALGEA GIERAFAIQE LTLPLALAGE DVIGQARTGT GKTLGFGIPL LQRVITPGDG
TPQALVVVPT RELCLQVTHD LTDASKHMDV RVLAIYGGRP YEPQIAALRK GVDVVVGTPG
RLLDLAEQRH LVLGKVRSLV LDEADEMLDL GFLPDIERVL RMVPDERQTM LFSATMPGPI
ITLARTFLNQ PTHVRAEEND AGAVHERTEQ FIYRAHALDK VELLARVLQA RDRGLSMIFT
RTKRTAQKVA DDMAERGFAV AAVHGDLGQG AREQALRAFR SGKIDVLVAT DVAARGIDVE
GVTHVVNYQC PEDEKTYVHR IGRTGRAGRT GVAVTLVDWD EIPRWQMISD ALNLGKRDPV
ETYSTSDHLF AELGIPAGST GRLPLGLRTR AGLDAEPEEN LKGDKKPAKS RRRTGRTGRA
GSGEGEAASS APQQGGQAGQ AGESGEEKST RPRRRRRSRG GVSSGEAAGD GAGGESVSAS
ASASASASTS AATSAAASAQ VGGGESGSGT GQAQEPKAEA SGDAKPRRRR RRRPSGEAGA
TTETAPSAD
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