| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amir_0714 |
|---|
| Symbol | |
|---|
| ID | 8324877 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Actinosynnema mirum DSM 43827 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013093 |
|---|
| Strand | + |
|---|
| Start bp | 790326 |
|---|
| End bp | 791105 |
|---|
| Gene Length | 780 bp |
|---|
| Protein Length | 259 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 644941258 |
|---|
| Product | undecaprenyl diphosphate synthase |
|---|
| Protein accession | YP_003098523 |
|---|
| Protein GI | 256374863 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG0020] Undecaprenyl pyrophosphate synthase |
|---|
| TIGRFAM ID | [TIGR00055] undecaprenyl diphosphate synthase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGGGTCTCC GCGAACGCGT CAAGAACGTC CTCCTCAAGG GCTACGAGTA CCGCCTCACC
CGCTGGTTGG ACGGAAGACA ACGACCACGC CACGTCGGCG TGGTGCTCGA CGGCAACCGC
AGGTGGGCCA AGGAAGCGGG CTTCGACGAC GTCGCCCACG GCCACCTCGC CGGTGCGCGC
AAGATCCTGG AGCTGCTGAA CTGGTGCCGG GACGCCGAGG TCGAGGTGGT CACCCTGTGG
CTGCTGTCCA CGGACAACCT CACCAGGCCC ACCAAGGAGC TCGAACCGCT GCTCGGCATC
ATCGCCGACA TCGTCGACAA GCTGGCCGAG CCCGCCAACC CCTGGCAGGT GCGCCACGTC
GGCGCGCTCG ACATGCTGCC CACCGAGACC GCGGCGCGCC TGTCCGCGGC CTCGCTGCGC
ACCAGGGGCC GCACGGGGCT CCAGGTCAAC GTGGCGGTCG GCTACGGCGG CCGTCAGGAG
ATCGCCGACG CGGTGCGCAA GCTGCTGCAG AAGCACGCCG AGTCCGGCGG GACGATCGAG
GAGCTCGCCG AGGTCCTGGA CGTGGACCAC ATCGCCGAGC ACCTCTACAC CTCCGGCCAG
CCCGACCCGG ACCTGCTCAT CCGCACCTCG GGCGAGCAGC GGCTGTCCGG GTTCATGCTG
TGGCAGTCGG CGCACTCCGA GTTCTGGTTC TGCGAGGCCT ACTGGCCCGA ATTCCGCAGG
ACCGACTTCC TGCGCGCCCT GCGCGACTAC GCGATCCGGC ACCGCCGCTT CGGCTCCTGA
|
|---|
| Protein sequence | MGLRERVKNV LLKGYEYRLT RWLDGRQRPR HVGVVLDGNR RWAKEAGFDD VAHGHLAGAR
KILELLNWCR DAEVEVVTLW LLSTDNLTRP TKELEPLLGI IADIVDKLAE PANPWQVRHV
GALDMLPTET AARLSAASLR TRGRTGLQVN VAVGYGGRQE IADAVRKLLQ KHAESGGTIE
ELAEVLDVDH IAEHLYTSGQ PDPDLLIRTS GEQRLSGFML WQSAHSEFWF CEAYWPEFRR
TDFLRALRDY AIRHRRFGS
|
|---|
| |