Gene Amir_0585 details

Gene Information

• Locus tag: Amir_0585
• ID: 8324744
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Actinosynnema mirum DSM 43827
• Kingdom: Bacteria
• Replicon accession: NC_013093
• Strand: -
• Start bp: 642843
• End bp: 643604
• Gene Length: 762 bp
• Protein Length: 253 aa
• Translation table: 11
• GC content: 69%
• IMG OID: 644941127
• Product: transposase IS4 family protein
• Protein accession: YP_003098396
• Protein GI: 256374736

Plasmid Coverage information

• Num covering plasmid clones: 16
• Plasmid unclonability p-value: 0.384554
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGCTTGTCT ACCCATCCGC GATCGACCTG TCCAGTTCAC ACCTTCAGTT CCTGGCACGG 
GAACTGACCA CGCACCGGCG CCGGATCGGC AGCAGGTGGC GCAGGCTCGA CCCCGGCCGC 
CAAGCCCTGC TGGTCCTGGC GCACCTGCGC TGCGGCGACA CCTACACACG ACTGGCCGTC 
GGATTCGGCG TCGGTCTGGC CACCGTCTGC CGCTACATCC ACGAAGCGGT CGAACTCCTG 
GCCGCACTGG CACCGGACCT GGCCGACGCG GCGAAAGTCG CCTCACGCAA GGCCTACGTC 
ATCCTCGACG GCACCCTGTT ACTCATCGAC CGCGTCGCCG CCGACCGGCC GTACTACTCC 
GGGAAGCACA AGCGGCACGG CATGAACGTC CAGGTCCTCG CCGATCCGGC CGGGCGACTG 
CTCCGGGTCT CGCCCGCGCT GCCGGGCTCG GTCCACGATC TGACCGCGGC TCGCATTCAC 
GGCATCGTCG ACGCCCTGGC CGCAGCGGAC ATCCCGTGCT GGGCGGACAA GGCCTACCGG 
GGCGCCGGCG GCCCGGTCCG CGTCCCCTAC CGAGGCAAGT GGCACAACTT GTCACCGGGG 
CAGCAGGCGG TCAACCGCTC CCACGCCCGT ATCCGCGCCC CGGGTGAACG CGCCGTCTCC 
ACCCTCAAGA CCTGGCGGCT ACTGCGCAGA CTCCGCTGCT CCACCACCCA CATCACCAAC 
CTGACCAGAG CCGTCCTCAC ACTCCACCTC AACGCCGGAT GA 

 

Protein sequence

MLVYPSAIDL SSSHLQFLAR ELTTHRRRIG SRWRRLDPGR QALLVLAHLR CGDTYTRLAV 
GFGVGLATVC RYIHEAVELL AALAPDLADA AKVASRKAYV ILDGTLLLID RVAADRPYYS 
GKHKRHGMNV QVLADPAGRL LRVSPALPGS VHDLTAARIH GIVDALAAAD IPCWADKAYR 
GAGGPVRVPY RGKWHNLSPG QQAVNRSHAR IRAPGERAVS TLKTWRLLRR LRCSTTHITN 
LTRAVLTLHL NAG