| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amir_0522 |
|---|
| Symbol | |
|---|
| ID | 8324681 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Actinosynnema mirum DSM 43827 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013093 |
|---|
| Strand | + |
|---|
| Start bp | 563263 |
|---|
| End bp | 564681 |
|---|
| Gene Length | 1419 bp |
|---|
| Protein Length | 472 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 644941066 |
|---|
| Product | amino acid permease-associated region |
|---|
| Protein accession | YP_003098335 |
|---|
| Protein GI | 256374675 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0531] Amino acid transporters |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGGGGAAT CGGCAGGCAA GACCGAACGA CCCGCGCAGC CCGAACAGCC CGCGCAGCCC
GCGCAGCCCG AGCTGAACCG GGCCATCGGC CCCAAGCTGC TGCTGTTCTT CGTGGTCGGC
GACATCCTCG GCACCGGCGT CTACGCGCTG ACCGGCAACG TGGCGGGCAA GATCGGCGGC
GCCCTCTGGC TGCCGTTCCT GATCGCCTTC GCCGTCGCGT TCCTCACCGC GTTCAGCTAC
CTCGAACTCG TCGGCAAGTA CCCGAAGGCC GCAGGCGCCG CGCTCTACGC CCACCGCGCG
TTCGGCGTCC AGTTCCTCAC CTTCATGGTC GCCTTCGCCG TGATGAGCTC CGGCATCACC
TCGGCCGCCT CGGCCGCGCT CGCGTTCGGC CGGACCTACC TCCAGTCCGT GCTCCGCGAG
TTCTCCTCCG ACTCGGTCAC GGTCTCCGCG TCCCTGGTCG CGGTGCTGTT CATCCTCGGC
CTCGCGGTGG TGAACCTGCG CGGCGTCTCC GAGTCGGTCA AGGCCAACGT CGTGCTCACC
TGCATCGAGG TCTCCGGCCT GCTGATCATC ATCGTGATCG GCGCGCTCGC GGTGGCCTCC
GGCGACGGCG ACCCGTCCCG CCTGGTGCAG ATCGACCCGG CCCCCGGCCA GTCCGCGCTG
ATCGCGATCA CCTCGGCGAC CTCGCTCGCG TTCTTCGCCA TGGTCGGCTT CGAGGACTCG
GTCAACATGG CCGAGGAGTG CCGCGACCCG GTCCGCATCT TCCCGCGCGC GGTCCTGTGG
GGCATGGGCA TCGCCGCGCT GATCTACGTC CTGGTCGCGG TCACCTCGTC GCTGCTGATC
CCCGCCGACG AGCTCGCCGC CTCCGGCAGC AACGCCCTGC TCAAGGTGGT CCAGGTCGGC
GCGCCCTCGT TCCCGCTGTG GGTGTTCTCC CTGATCGGCC TGTTCGCCGT CATCAACTCC
GCGCTGATCA ACATGCTGAT GGCCAGCCGC CTCGTCTACG GCATGGCGGG CGAGCGGATC
ATCCCGAGGT TCTTCGGCGT CGTGCACCCC ACCCGCCGCA CCCCGTGGGT CTCCGTCCTG
TTCACCACCG GCGTCGCGAT CGCCCTCGTC CTGACCACCG ACATCGCCAA GCTCGGCGGC
ACCACCGCGC TGCTGCTCCT GGTCGTCTTC GCCATCGTCA ACGTCGCCGT CCTGGTGCTG
CGCAAGGACC GCGCCGACCA CGAGCACTTC CGCGCCCCCA CGATCGTCCC CGTGCTGGGC
GCGCTCACCT GCGCCTACCT GGCCAGCCCG CTGTCCGGCC GCCCGTCCGC CGACTACCTG
GTCGCGCTCT ACCTGCTGCT CGCGGGCCTG GTGCTGTGGC TGATCAACCG GGTCACCCAC
GGCGTCGTCG AGGTCGACCC GGCCAAGCTC GGCAAGTGA
|
|---|
| Protein sequence | MGESAGKTER PAQPEQPAQP AQPELNRAIG PKLLLFFVVG DILGTGVYAL TGNVAGKIGG
ALWLPFLIAF AVAFLTAFSY LELVGKYPKA AGAALYAHRA FGVQFLTFMV AFAVMSSGIT
SAASAALAFG RTYLQSVLRE FSSDSVTVSA SLVAVLFILG LAVVNLRGVS ESVKANVVLT
CIEVSGLLII IVIGALAVAS GDGDPSRLVQ IDPAPGQSAL IAITSATSLA FFAMVGFEDS
VNMAEECRDP VRIFPRAVLW GMGIAALIYV LVAVTSSLLI PADELAASGS NALLKVVQVG
APSFPLWVFS LIGLFAVINS ALINMLMASR LVYGMAGERI IPRFFGVVHP TRRTPWVSVL
FTTGVAIALV LTTDIAKLGG TTALLLLVVF AIVNVAVLVL RKDRADHEHF RAPTIVPVLG
ALTCAYLASP LSGRPSADYL VALYLLLAGL VLWLINRVTH GVVEVDPAKL GK
|
|---|
| |