Gene Amir_0256 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmir_0256 
Symbol 
ID8324413 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameActinosynnema mirum DSM 43827 
KingdomBacteria 
Replicon accessionNC_013093 
Strand
Start bp278914 
End bp279594 
Gene Length681 bp 
Protein Length226 aa 
Translation table11 
GC content76% 
IMG OID644940800 
Productalkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen 
Protein accessionYP_003098071 
Protein GI256374411 
COG category[C] Energy production and conversion
[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0526] Thiol-disulfide isomerase and thioredoxins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAGCGCGG CGGCGCGGTG GTCGGTGGTC GTCCTGGTGC TCGCGGTGGC GGGCGTGGTC 
GCCCTGTGGC CGAGGGGCGA GGACCCGGCG AGCCCGGTGA TCCCCCAGCC CCAGCGCGAC
ACGTCCCAGC GCGCGGACCT GGGCGTGGCG CGCAACAAGG CCGCGCTGCG GCCCTGCGAC
CAGTTCTCGG GGAACTCGGC GAGCCCCGCT TCCGCGAATG CCGCGTCCCC GAGCCCCGCG
TCCCCGAGCG CGGGCCCCAC GAGCACGAGC GCGGGTCCCG AGGCGCTGCG CGGCGCCACC
GCCGTGTGCC TGGGCGACGG TGAGCGGGTC GACGCCGCGA CCGCGCTGTC CGGCCGGGTG
CTGGTCAACT TCTGGGCGTC CTGGTGCGCG CCCTGCCGCG AGGAGCTGCG CGTGCTGGAC
GACTACTCCC AGCGCCCCGG CGCGATCCCG GTGCTCGGCG TCCAGGTCAA GAGCGGCGAG
GCGGACGGCC TCGACCTGCT CTCCCGGATC GGCGTGCACC TGCCGTCGCT GGTCGACGAC
TCCGAGGCGC TGCTGAGGGC CTTCAAGGTC CCGCCCACGC TGCCCGCCAG CTTCCTGGTC
GGCGCGGACG GCTCCATCAC CCCGGTGACC GACCCGCTCG TGTTCACCAG CGTCGATCAG
GTCCGCGAGG TGGTCGGATG A
 
Protein sequence
MSAAARWSVV VLVLAVAGVV ALWPRGEDPA SPVIPQPQRD TSQRADLGVA RNKAALRPCD 
QFSGNSASPA SANAASPSPA SPSAGPTSTS AGPEALRGAT AVCLGDGERV DAATALSGRV
LVNFWASWCA PCREELRVLD DYSQRPGAIP VLGVQVKSGE ADGLDLLSRI GVHLPSLVDD
SEALLRAFKV PPTLPASFLV GADGSITPVT DPLVFTSVDQ VREVVG