Gene Amir_0201 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmir_0201 
Symbol 
ID8324353 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameActinosynnema mirum DSM 43827 
KingdomBacteria 
Replicon accessionNC_013093 
Strand
Start bp215613 
End bp217754 
Gene Length2142 bp 
Protein Length713 aa 
Translation table11 
GC content76% 
IMG OID644940742 
ProductDNA polymerase III, subunits gamma and tau 
Protein accessionYP_003098018 
Protein GI256374358 
COG category[L] Replication, recombination and repair 
COG ID[COG2812] DNA polymerase III, gamma/tau subunits 
TIGRFAM ID[TIGR02397] DNA polymerase III, subunit gamma and tau 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGTCAGGC CCGTGGCGCT CGCCCTCTAC CGCAAGTACC GACCGGCTAC CTTCGCCGAG 
GTCATCGGCC AGGAGCACGT GACCGATCCC CTGCGCATCG CGCTGGGCGC CGGGCGGGTG
AACCACGCCT ACCTCTTCTC CGGCCCGCGC GGCTGCGGCA AGACCTCCAG CGCGCGCATC
CTCGCCAGGT CGCTGAACTG CGCGAAGGGG CCCACCCCCG ACCCGTGCGG CGAGTGCAAC
TCCTGCGTCG GCCTCGCCCC CAACGGGCCC GGCAGCGTCG ACGTGGTCGA GCTGGACGCC
GCCTCGCACG GTGGTGTGGA CGACACCCGC GAGCTCCGGG AGAAGGCGTT CTACGCGCCC
GCCGAGGCCA AGTACCGGGT GTTCATCATC GACGAGGCCC ACATGGTCAC CACGCAGGGC
TTCAACGCCC TGCTGAAGAT CGTGGAGGAG CCCCCGGAGC ACCTGATCTT CATCTTCGCC
ACCACCGAGC CGGACAAGGT GCTGCCGACG ATCCGCTCGC GCACCCACCA CTACCCGTTC
CGGCTCATCC CCCCGGTCTC GATGCGCGCG CTGCTGGAGC GCAACTGCGC CGCCGAGGGC
GTCGCGGTCG AGCCCTCGGT CTTCCCGCTG GTCATCCGCG CGGGCGGCGG CTCCGCCCGC
GACACCCAGT CCGTCATGGA CCAGTTGCTG TCCGGCGCGG GCCCCGAGGG CGTGCGCTAC
GACCGGGCCA TCGCGCTGCT CGGCGTCACC GACGTCGCGC TGATCGACGA CGTGGTCGAG
GGGCTCGCCG CCGGTGACGG CTCCGCCGTG TTCGGCACCG TGGACCGGCT CGTCGACGCG
GGCCACGACC CGCGCCGCTT CGCCACCGAC CTGCTCGACC GGCTGCGCGA CCTGGTGCTG
CTGTGCGCGG TGCCCGACGC GGGCGAGCGC GGGCTGGTGT CCGCGCCCGA GGACGTGCTG
GCCAAGATGA TCCCGCAGGC CCAGAACATC GGGCCCGCCA CGCTCACCCG GTACGCCGAG
GTGCTGCACC AGGGGCTCAC CGACATGCGC GGGGCCACCG CGCCCCGGCT GCTCCTGGAG
CTGCTCTGCG CGCGGATGCT GCTGCCCTCG GTGTCGGACG CCGAGTCGGC GGTGCTCCAG
CGCGTCGAGC GGCTGGAGAA GCACGGCGTC GCGGCGGGCG GCGGCAACGG CGGTGGCGGC
GCTCCCGCAG TCGAGTCCAA GTTCCAGCGC CCCTCGCAGC GCCAGGCCGA GCCCGAACCG
GCCCCCGCGC AGGCCGCGCC CCAGGCCGTG GCGCCCCCGG TCGCCGCGAC GCAGATCGCA
GCGCCCCCGG TCGTCGCACC GCCTGCCGCG GCGCAGCCGG TCGCCGCGCC TGCCGAGCCG
ACCCCGCAGC CCGCCACCCC GCAGCAGCCC GCCGCGCAGG CCCGCCCGAC CGCGCAGGCC
GCACCGCAGC AGGCCCGGTT CCAGCGGCCC TCCCAGTCGC CTCCGCAACC GGCCTCCGCC
GCCGCCGAAC CCGCCGCGCC CGCAGCCGCC CCGGCATCCG GCGCCGTCGA CGCGGTCGAG
ATCCGCAGGC GCTGGCCCGA GCTGCTCGGC GTGGTCAAGG GGGCCAGCCG CAGCACCGAG
GCCATGCTGA CCAACGCCAC CGTCGCCGAG GTCGACGGCA CGTCGGTCAC CCTCACCCAC
ACCTCCGGCC CGCTGGCCCG CAGGCTCGCC GAGCAGCGCA ACGCCGAGGT GATCGCCAAG
GCGTTCGGCC AGGTCCTCGG CGGCAGCTGG CAGGTCCGCT GCGTCCAGGG CGACGCCGCC
ACCGCGCAGC GCCCCCAGCA GCAGTCCCGC CAGGCCAGGC CCGCCCCCGC GCGGCCCAGC
CAGGCCGAGA GCGCGCCCGC GCCCGGCCAC GGCAGGCAGA TGCTGGAGAA GGCCATGCAG
GCGCAGGCCA ACCGGTCGAC CGGCCGCGCG GGCGACGACA TCCCGCTGCC GCCCGAGCCG
GACGAGCCCG ACGACCCCCT CCCACCGGAG CCGGTGGACG AGGAGGAGAT GTTCGCCGAG
GCGGCCAGGC CGGGTGAGCC GGGGGAGGAG CGCCTCGACC CCGAGGCGGT CGTGCTGAAG
CTGCTCGCCG ACGAGCTCGG CGCGCGCCCC TTGAAGAGCT GA
 
Protein sequence
MVRPVALALY RKYRPATFAE VIGQEHVTDP LRIALGAGRV NHAYLFSGPR GCGKTSSARI 
LARSLNCAKG PTPDPCGECN SCVGLAPNGP GSVDVVELDA ASHGGVDDTR ELREKAFYAP
AEAKYRVFII DEAHMVTTQG FNALLKIVEE PPEHLIFIFA TTEPDKVLPT IRSRTHHYPF
RLIPPVSMRA LLERNCAAEG VAVEPSVFPL VIRAGGGSAR DTQSVMDQLL SGAGPEGVRY
DRAIALLGVT DVALIDDVVE GLAAGDGSAV FGTVDRLVDA GHDPRRFATD LLDRLRDLVL
LCAVPDAGER GLVSAPEDVL AKMIPQAQNI GPATLTRYAE VLHQGLTDMR GATAPRLLLE
LLCARMLLPS VSDAESAVLQ RVERLEKHGV AAGGGNGGGG APAVESKFQR PSQRQAEPEP
APAQAAPQAV APPVAATQIA APPVVAPPAA AQPVAAPAEP TPQPATPQQP AAQARPTAQA
APQQARFQRP SQSPPQPASA AAEPAAPAAA PASGAVDAVE IRRRWPELLG VVKGASRSTE
AMLTNATVAE VDGTSVTLTH TSGPLARRLA EQRNAEVIAK AFGQVLGGSW QVRCVQGDAA
TAQRPQQQSR QARPAPARPS QAESAPAPGH GRQMLEKAMQ AQANRSTGRA GDDIPLPPEP
DEPDDPLPPE PVDEEEMFAE AARPGEPGEE RLDPEAVVLK LLADELGARP LKS