| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ajs_4269 |
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| Symbol | |
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| ID | 4670494 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax sp. JS42 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008766 |
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| Strand | - |
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| Start bp | 17816 |
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| End bp | 18715 |
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| Gene Length | 900 bp |
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| Protein Length | 299 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 639826941 |
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| Product | conjugal transfer protein TrbG |
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| Protein accession | YP_974103 |
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| Protein GI | 121582574 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3504] Type IV secretory pathway, VirB9 components |
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| TIGRFAM ID | [TIGR02775] P-type conjugative transfer protein TrbG |
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Plasmid Coverage information |
| Num covering plasmid clones | 39 |
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| Plasmid unclonability p-value | 0.166546 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.0145862 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGAAAA CCCTCTCCGC TTTGATCGTG GGCGCTGCTG TGGCGGTGCC CTCCCTGGCC
CTGGCCGCCC CTGGCGACGA CATTGCCGAC AAGTATTTCA ACAAGACCAA CCCGACGCTG
ACCGCTCAAG AGCGCGCGGC GCTCGCCATC GCCAAGCGGT GGGAAGCGGG GTCGGCGACC
GGCATCAAGC CGGTGGCCGG CTCGGGCGGT GCCATCAAGT TCGTGTACGG CGCGCAGCAG
CCGAGCATCG TTTGCGCGGT GCTCCAGGTG TGCGACGTGG CCTTGCAGGC CGGCGAACAG
GTGAACTCGA TCAACCTGGG CGACACGGCC CGGTGGACGG TCGAGCCGGC CATCACCGGC
AGCGGTGCGA CCGAGGTTCA GCACCTCATC ATCAAGCCGA TGGACGTGGG CCTCGAAACC
AGCCTGGTCG TGACCACGAA CCGCCGCAGC TACCACTTCC GCCTGCGCTC GCATCGCACC
GAGTACATGC CGCAAGTCTC GTTCACGTAC CCCGAGGAAG CGCAAGCCAA GTGGGACGCG
ATCCAGCGCC GCGAGAAGCA GGAACGCACC GACAACACCC TGCCGGCCAC CGGCGAGTAC
CTGGGCGATC TCTCGTTCGA CTATGAGCTG TCCGGGTCGG CGAGCTGGAA GCCTGTGCGC
GTCTACAACG ATGGCCGCAA GACCATCATC GAAATGCCCG GCACGATGCA GCAGACCGAA
GCGCCGACGC TCCTGGTCGT GCGCAAAGAG GGCGGCCTGT TCACCGACGA CGAAACGGTG
TTGGTCAATT ACCGCGTGCA GGGCAATCGC TACATCGTGG ACACGGTGTT TGACCGCGCG
ATCCTGATTG CCGGTGTTGG CAGCAGCCAA GACCGCGTGA CCATCAGCCG GAGGAAGTGA
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| Protein sequence | MKKTLSALIV GAAVAVPSLA LAAPGDDIAD KYFNKTNPTL TAQERAALAI AKRWEAGSAT
GIKPVAGSGG AIKFVYGAQQ PSIVCAVLQV CDVALQAGEQ VNSINLGDTA RWTVEPAITG
SGATEVQHLI IKPMDVGLET SLVVTTNRRS YHFRLRSHRT EYMPQVSFTY PEEAQAKWDA
IQRREKQERT DNTLPATGEY LGDLSFDYEL SGSASWKPVR VYNDGRKTII EMPGTMQQTE
APTLLVVRKE GGLFTDDETV LVNYRVQGNR YIVDTVFDRA ILIAGVGSSQ DRVTISRRK
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