| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ajs_4219 |
|---|
| Symbol | |
|---|
| ID | 4670352 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidovorax sp. JS42 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008765 |
|---|
| Strand | - |
|---|
| Start bp | 50359 |
|---|
| End bp | 51294 |
|---|
| Gene Length | 936 bp |
|---|
| Protein Length | 311 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 639826893 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_974055 |
|---|
| Protein GI | 121582523 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG5534] Plasmid replication initiator protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 38 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 29 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGCTTTCCG ACTTCCTGGC CGATGAAAGT GGCGGCGGCC CGGATGCAGC GGCCGGCTCG
TCCCCCGCTC AAGCAGACCT GTTCGTAGTC ATGGAAACCG TCCATGACTG GCCCATCAAG
GATGACGTGT CCACGATGGA GTTTCCCATC TTCTCGCTGT CCAAGAAGCC CGACACGCAA
ATCCGCACCT ACTCCCGCGC CGGCAAGACC GTGCGCGTGA TCCCTTCGGC GCTGGGTGCG
GCAACGCTGT TCGACAAGGA TTTGCTGATC TACTGCATCA GCCACATCGT CAAGGCGGCC
GACGCCGGCA TGAAGGTGGG ACGGCGCTTG AAGTTGAGTT CGCATCCGTT CCTGGTCAGC
ACCAAGCGCA GCACGGGCGG CACTGCCTAC GAGGGGATCG TTGACATGTG CCGCCGCCTG
AAGGGCACGA CGATTGAAAC GAACGTCAAG ACCAACGAGC AGGAGCGGAT CGAGGGCTTC
GGCCTGATCG AAGACTACAA GGTGACGCAG TACACCAAGA ACGGCAAGGG GGCTTTGGAG
CTGGAAGTCA CGTTGTCGGA CTGGCTCTAC CGGGCTGCAA TCGCATCGGA CATCCTGACC
TTGCATCCTG GCTACTTCTC CCTTGGCCAA GCCCTGGAGC GCCGGCTATA CGAGCTGGGC
CGCAAGCATT GCGGGCAGCA AGCGTGGTTC TGCATCAGCC TTCCGTTGTT GCAGGAGAAG
GCCGGTTCGG TTCAGGAGGC GCGCTACTTC AAGCAGGAAA TCAAGGGCAT TCTCAAAGTC
AATCGCTTGC CAGACTTCAA GCTCTACCTC GATACATCGA CCAAGCCCAA CCAGCTCGTC
TACGTCACGC GAGACAGCCG CAAGCTCATG CTGGAGGCCA CGCAGAAGGG CAGGATCGAC
TGGCTGGCCG GGCTCTTGCA GCAACGTCTA GCCTGA
|
|---|
| Protein sequence | MLSDFLADES GGGPDAAAGS SPAQADLFVV METVHDWPIK DDVSTMEFPI FSLSKKPDTQ
IRTYSRAGKT VRVIPSALGA ATLFDKDLLI YCISHIVKAA DAGMKVGRRL KLSSHPFLVS
TKRSTGGTAY EGIVDMCRRL KGTTIETNVK TNEQERIEGF GLIEDYKVTQ YTKNGKGALE
LEVTLSDWLY RAAIASDILT LHPGYFSLGQ ALERRLYELG RKHCGQQAWF CISLPLLQEK
AGSVQEARYF KQEIKGILKV NRLPDFKLYL DTSTKPNQLV YVTRDSRKLM LEATQKGRID
WLAGLLQQRL A
|
|---|
| |