| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ajs_4173 |
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| Symbol | |
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| ID | 4670363 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax sp. JS42 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008765 |
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| Strand | - |
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| Start bp | 10315 |
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| End bp | 11091 |
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| Gene Length | 777 bp |
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| Protein Length | 258 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 639826847 |
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| Product | hypothetical protein |
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| Protein accession | YP_974009 |
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| Protein GI | 121582477 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR02742] type-F conjugative transfer system pilin assembly protein TrbC |
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Plasmid Coverage information |
| Num covering plasmid clones | 41 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.0999993 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACAAGA AAACTGTCAT CGGGCTGATG CTGCTGGCCG CTTTCGCCCG CGAAAGCGTG
GCGCAGAGCA CGCCGACCGC ATCCCAGCTC GACCAAGAAC GCCAACGCAT CGAGCTTGAG
CGCAAGCAGA TGTTTGACCC GAACAACCCC GCCTCGAAGG CCAAGAAGGG CGCTATGCCC
AACTCGGCCG ACATCGACCG GGAAATGCGC CGCGTAGATC GTGAACGCAA GCAGATGTTC
GATCCAAACA ACCCCGCGAC CAAGAACGCC GCCAACGTGT TCCCCAACGT GCCGACGCCG
GAGCGCGCCG GGATCGACAT CGAGGCGCTG GCCAAGCAAT ACGAGCAAAA GGCCCAGGCC
CGCAAGATGG ATGACCTGAT GATTTTCGCC AGCTTCACGA TGCCGGCCGA ATCACTCAAG
CGGATCGTCA GCCAAGCCAA CCGGGTGGGG GCTTCTGTGG TGCTGCGCGG TTTCAAGAAC
AACTCGCTGA AGGATACGGC GCTGGCCATC AAGGAGCTGG GAGAGCAGGG CGGCAACGTC
CTGGTGAACC CCAACGCCTT CACCAAGTAC AAGGTCAAGG CTGTTCCCAC GATGGTGCTG
GCCAAGGCCG CAACCATCGA CCAAGTGGAC AACGAGGGCT GCGCCCTCCC TGACAACTTT
GTGGCAGTGG CCGGTGACGT TTCGCTGGAC TACGCCCTGG ACGAGATTGT GCGCCGCGCT
CCGCAGTTTG AAGCCGTGGC GTCTCGCTAC CTTCGCCAGA TCAGGGGGAA CCAATGA
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| Protein sequence | MNKKTVIGLM LLAAFARESV AQSTPTASQL DQERQRIELE RKQMFDPNNP ASKAKKGAMP
NSADIDREMR RVDRERKQMF DPNNPATKNA ANVFPNVPTP ERAGIDIEAL AKQYEQKAQA
RKMDDLMIFA SFTMPAESLK RIVSQANRVG ASVVLRGFKN NSLKDTALAI KELGEQGGNV
LVNPNAFTKY KVKAVPTMVL AKAATIDQVD NEGCALPDNF VAVAGDVSLD YALDEIVRRA
PQFEAVASRY LRQIRGNQ
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