Gene Ajs_3992 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAjs_3992 
Symbol 
ID4671087 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax sp. JS42 
KingdomBacteria 
Replicon accessionNC_008782 
Strand
Start bp4246246 
End bp4247103 
Gene Length858 bp 
Protein Length285 aa 
Translation table11 
GC content75% 
IMG OID639841032 
Productbiotin--acetyl-CoA-carboxylase ligase 
Protein accessionYP_988172 
Protein GI121596276 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0340] Biotin-(acetyl-CoA carboxylase) ligase 
TIGRFAM ID[TIGR00121] birA, biotin-[acetyl-CoA-carboxylase] ligase region 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.182521 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGCCCCG CCGCCACCCC CGTGCGCTGG CCGGCCGAGG CCCTGTGGGA GGCGATTGCG 
CCGCTGCTGC CCGGCTTCAC CGTGGAGGTC TTGCCCAGCA TCGACTCCAC CAACAGCGAG
CTCATGCGCC GCGCGCGCGA CGGCCGGCTG GAGCCCACGC TGCTGGTGAC GGAGGAGCAG
ACCGCCGGCC GCGGCCGCCT GGGGCGCGAC TGGCACAGCG CCGCCACCTA CCGCGACACC
GGCGTGGTGC CCGCGCTCAC GTTTTCGCTG GGCCTGCCGC TGGCGCCGCA CGACTGGTCG
GGCCTGTCGC TGGCCGTGGG CGTGAGCGTG GCGCAGGCGC TGCAGCCCGT CCTGCCCCCC
GAAGGCAGCG GGCACCCGCG CGTCCTGCTC AAGTGGCCCA ACGACCTGTG GCTTCAGGAT
GGGCGCAAGC TCGGCGGCAT TCTGGTGGAG ACGGCCACGC TGACCGCGCC CGGCGCGGCC
GTGCCGCCGC TGGTGGCGGG CCAGAGCCGC TACGTGGTGG TGGGCATCGG GCTGAACGTG
TTGCCCGTGC TGGCCGACGG GCTGCGCACG CCTCCCGCGT GCCTGCGCGA GGTGGACACC
ACGCTCACCG CGGCCAGCGC GCTGCAGCGC ATCGCGCCGC CGCTGGTGCA TGCGCTGCTG
GGTTTTGCCG AGCATGGCTT CGCCCCCTTC CAGGCGCGCT TTGCGCAGCG CGACCTGCTG
GCCGGGCGCG CCGTCACGCT GAGCGACGGC ACGCAGGGCA CGGCCCACGG CGTGACCGAG
GACGGCACGC TGCTGGTGCA CACCGCGCGC GGCATGCAGC CCATCACCAG CGCCGAGATC
AGCGTGCGCC CGCAATGA
 
Protein sequence
MSPAATPVRW PAEALWEAIA PLLPGFTVEV LPSIDSTNSE LMRRARDGRL EPTLLVTEEQ 
TAGRGRLGRD WHSAATYRDT GVVPALTFSL GLPLAPHDWS GLSLAVGVSV AQALQPVLPP
EGSGHPRVLL KWPNDLWLQD GRKLGGILVE TATLTAPGAA VPPLVAGQSR YVVVGIGLNV
LPVLADGLRT PPACLREVDT TLTAASALQR IAPPLVHALL GFAEHGFAPF QARFAQRDLL
AGRAVTLSDG TQGTAHGVTE DGTLLVHTAR GMQPITSAEI SVRPQ