Gene Ajs_3938 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAjs_3938 
Symbol 
ID4673455 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax sp. JS42 
KingdomBacteria 
Replicon accessionNC_008782 
Strand
Start bp4192724 
End bp4193266 
Gene Length543 bp 
Protein Length180 aa 
Translation table11 
GC content71% 
IMG OID639840980 
Producthypothetical protein 
Protein accessionYP_988120 
Protein GI121596224 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.158904 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACCAC GCATGCAGTG GGTCGCCGTT GCCGTTTCCG CCGCCGTTCT GGCGGCCTGC 
GGGGGCGGCG GCGCCGACAC CACGCCCGCC GCGGCGGTCA CCGCAGTCAA GGTGATGGGC
GACAGCCTGG CGGACAGCGG CACCTTCGGG CTGAAGTTCA CGGTCCAGGG CACGGCCCCT
ACGGGCGCGG GCTCCACGGC CATCTGGCCC GAGCGCGTGG CCGCCAGTTA TGGCCGCACG
CTGTGCCCGC ACTATGTGTC CGCGGGAGGC AGCTTCAGCG CCAAGGCCGA CTGCACGAAC
TACGCGGTAG GCGGCGGGCG CATCAACAAC TTCACGGCGC CCACCTCGCC CGTGTCCATC
CTACAAGAGC TTCCTCAAGA CCACGGCCCA CTTGTCCAGC GGCCAGAGCA TCGGCATGCG
GCTGAACCCC AACGTGGTGG CGGTGGGGGT GGGCTACCGG TTCTGAGAGC GCCCCAGGCG
CCGAGGGAGG GGGCGCGCCG CGGGGTGCGC GAAGTGCCCC AGGTTTTCGT CTCCGAGGCT
TGA
 
Protein sequence
MKPRMQWVAV AVSAAVLAAC GGGGADTTPA AAVTAVKVMG DSLADSGTFG LKFTVQGTAP 
TGAGSTAIWP ERVAASYGRT LCPHYVSAGG SFSAKADCTN YAVGGGRINN FTAPTSPVSI
LQELPQDHGP LVQRPEHRHA AEPQRGGGGG GLPVLRAPQA PREGARRGVR EVPQVFVSEA