Gene Ajs_3916 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAjs_3916 
Symbol 
ID4673375 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax sp. JS42 
KingdomBacteria 
Replicon accessionNC_008782 
Strand
Start bp4170721 
End bp4171230 
Gene Length510 bp 
Protein Length169 aa 
Translation table11 
GC content71% 
IMG OID639840958 
Productrare lipoprotein B 
Protein accessionYP_988098 
Protein GI121596202 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG2980] Rare lipoprotein B 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCACAAGC GCACCCTGCT CACCGCCGCG GCCCTGGCGC CGCTGGCCGC CCTCACCGCC 
TGCGGCTTTC GCCTGCGCGG CGCGCCGCAG TTCGCCTTCC GGTCCCTGTA CGTGCAGGCG
CAGCCCGGCT CGCCGCTGGC ACGCGAGCTG ATCCGCACGC TGCAGGGGGC GGGCGGGGAC
CTCGTGGTGC TGACGGCGCC CGCGCAGCTG CCCCAGGCCG AGGCGATCCT GGACGTGCTG
TCCGAGCAGC AGGAGCGCGT GGTGGTGGGC CTGAACGCCT CGGGCCAGGT GCGCGAGCTG
CAGCTGCGCC AGCGCGTGCG CATCCGCCTG CGCGGCCAGC AAGGCCAGGA ATGGATCGCC
GACACCGAGC TGCTGCAACA GCGCGACATC AGCTACAACG AAACCGTCGC CCTTTCCAAG
GAAGGCGAGG AGGCCATGCT GTTTCGCAAC ATGCGCACCG ACCTCGTGCA ACAGCTGATG
CGCCGCCTGG CGGCAGTGAA ATCGCTGTAA
 
Protein sequence
MHKRTLLTAA ALAPLAALTA CGFRLRGAPQ FAFRSLYVQA QPGSPLAREL IRTLQGAGGD 
LVVLTAPAQL PQAEAILDVL SEQQERVVVG LNASGQVREL QLRQRVRIRL RGQQGQEWIA
DTELLQQRDI SYNETVALSK EGEEAMLFRN MRTDLVQQLM RRLAAVKSL