Gene Ajs_3831 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAjs_3831 
Symbol 
ID4670736 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax sp. JS42 
KingdomBacteria 
Replicon accessionNC_008782 
Strand
Start bp4064303 
End bp4065043 
Gene Length741 bp 
Protein Length246 aa 
Translation table11 
GC content71% 
IMG OID639840864 
Productflagellar basal-body rod protein FlgF 
Protein accessionYP_988014 
Protein GI121596118 
COG category[N] Cell motility 
COG ID[COG4787] Flagellar basal body rod protein 
TIGRFAM ID[TIGR02490] flagellar basal-body rod protein FlgF
[TIGR03506] fagellar hook-basal body proteins 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.212792 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value0.292216 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACCGCA TCATCTACAC CTCCATGACC GGCGCGAACG CCGCCGCGCA CCGGCAGGCG 
GTGCTGGCCA ACAACCTGGC CAACGCCTCC ACCACCGGCT TTCGCGCCGA GATGTCCAAC
TTCCGCTCGG TGCCGCTGCA AGGCGGCGGC TCCACCACGC GCGTGTTCGC GCTGGAGGCC
ACCTCGGGCC ATGTGGACAC CCCCGGGCCC GCGCAGACCA CGGGCCGTCC GCTGGACGCC
ATGGCCGTGG GCAATGCCTG GTTCGCCGTG CAGGGTCTGG ACGGCGTGGA AACCTACACG
CGCGCCGGGT CCTTTCAGGT CACTGCCGCC GGACAGCTGG TCACCAGCAC CGGCATGGCC
GTGCTCTCGG ACGGCGGCGC ACCCATCGAC GTGCCCCCTA ATGCCGAAGT GACGCTGGGC
GCCGACGGCA CCATCACCGC CCGCCTGGCG GGCGAAGTAC CCCAGCCCGT GGCCCGCCTG
AAACTGGCCA CGCCCGCGGC GGACAACCCG CTCAAGCGCG GCGACGACGG GCTGTTCCGC
ACGGCCGGCG GCGACCCGCT GCCCGCCGAC CCCAACGCGC GCCTGCGCTC GGGCGTGCTG
GAGGGATCCA ACGTGAACCC GGTGGAATGC ATGGTCGGCA TGATCGCCGC CGCCCGCCAG
TTCGAACAAC AAATGCGCCT GCTGCAGACC GCCGAGAGCG ATGACAAGAG CGCAGGCCAG
CTGCTGAGCC TCAACGGCTA A
 
Protein sequence
MDRIIYTSMT GANAAAHRQA VLANNLANAS TTGFRAEMSN FRSVPLQGGG STTRVFALEA 
TSGHVDTPGP AQTTGRPLDA MAVGNAWFAV QGLDGVETYT RAGSFQVTAA GQLVTSTGMA
VLSDGGAPID VPPNAEVTLG ADGTITARLA GEVPQPVARL KLATPAADNP LKRGDDGLFR
TAGGDPLPAD PNARLRSGVL EGSNVNPVEC MVGMIAAARQ FEQQMRLLQT AESDDKSAGQ
LLSLNG