| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ajs_3811 |
|---|
| Symbol | |
|---|
| ID | 4670877 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidovorax sp. JS42 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008782 |
|---|
| Strand | - |
|---|
| Start bp | 4044510 |
|---|
| End bp | 4045949 |
|---|
| Gene Length | 1440 bp |
|---|
| Protein Length | 479 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 639840844 |
|---|
| Product | flagellar hook-associated 2 domain-containing protein |
|---|
| Protein accession | YP_987994 |
|---|
| Protein GI | 121596098 |
|---|
| COG category | [N] Cell motility |
|---|
| COG ID | [COG1345] Flagellar capping protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 32 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGGCCTTT CATCTACAGG CATTGGCAGC GGACTGCAGG TCGAGGACAT CGTCTCCAAG
CTGGTTGCGC TGGAAAGGCA GCCGATTGCC AAGCTGCAAT CCGTGGCTTT GTCGATGCAG
ACCAAGCTGT CCATCTTCTC CCAGGTCAAG TCGATGATGT CCACGCTGTC CGATGCGGCG
GCCAAGCTAT CCAAGAACAG CACCTGGGGT GGCATGGTGG CCACTTCGTC CAATAGCGCT
GCGGTGTCGG TCAGCGTGAT TGGCGCGGCC AGTGCTACGT CGTTCGGCAT CGGTGTGCAG
CAGCTGGCGC GGGCGCAGTC GGCGGCTTCG GCCTCGCTGG GTGCTCCGGG GGCGTCCGTG
GGAGGCGGCA GCCTGTCCAT TCAACTCGGA ACCTGGACGG GCACAGATAC GGCCTCTCCC
CAGTTCACCG AAGGCGCGGC GGGCGCCGTG CCGGTACAGA TCGATGCGGG CGATTCGCTT
GCCACGATTG CCTCCAAGAT CAACGGTGCA AAGGCCGGCG TCACGGCCAC GGTGCTGCGC
GATGCCAATG GCGAGCGCCT GCTGGTGCGT TCCGACAGCA CGGGCGCGTC CTCGGGTTTC
CGCATTCGGG TGACCGAGGA TGGCGCGGCT CCGGGTCTGT CCAATTTGGC GTTTGATCCC
CAGGGCGCGC CGGGCGCCGG CATGGCGGCC AATGCCATTC AATATGCGCA GAATGCGCAG
GCCACGGTCA ATGGCATTGC GGTGGAGTCG GCGACAAATA CGTTCACTGA CACCATTCCT
GGCCTGAGCT TTACTGCGTC GCAAATCACT ACCGCACCGG TCGAGGTGGC GGTGGGTTCG
GACACGGAAA CCTTGAAAAA AAACATTCAG GATTTTGTGA ATGCCTATAA CGGCCTCAAT
GACCTGTTAG GCGCATCCAC CAAGTACGAC AGCGCGAGCA AGACGGCGGG CGCCCTGCAG
GGCGACGGCA CCACGGTAGC GTTGCAGAAT ACGCTGCGTT CGATGATCGC CTCCACCGCG
GAGGGCACGG GTGCGTTTCA GCGGCTGGCC GACATCGGCA TTGACATCAA GACCGGTGGC
AAGCTGGAGG TTTCGGCCGA TAAGCTCGAT GCCGCGCTCA AGAACCCCGA GGCGCTCAAA
GCCCTATTTG CCACCAATGT GGGTTCTGGT TCGCAGGCAA ACGGTCTGGC CGTGAAGATG
AAGGCCCTGG CAGACCAGAT GTTGTTGCCC GAGGGCTTAC TCGACAACAA GGCCAGTGCA
CTGGGGGCCT CCATCAAGCG CAACAAGTCG GATCAGGATC GGGTCGATGA GCGGGCCTCC
ATTATGGAAA AGAGGCTGCG CGCCCAGTAC ACGGCGCTTG ACGCCAAGAT GGCCTCGTTG
TCGGGACTTG GCGCCTACGT CGGGCAGCAG GTTTCGCAGT GGAACCGCAC TAACAATTAA
|
|---|
| Protein sequence | MGLSSTGIGS GLQVEDIVSK LVALERQPIA KLQSVALSMQ TKLSIFSQVK SMMSTLSDAA
AKLSKNSTWG GMVATSSNSA AVSVSVIGAA SATSFGIGVQ QLARAQSAAS ASLGAPGASV
GGGSLSIQLG TWTGTDTASP QFTEGAAGAV PVQIDAGDSL ATIASKINGA KAGVTATVLR
DANGERLLVR SDSTGASSGF RIRVTEDGAA PGLSNLAFDP QGAPGAGMAA NAIQYAQNAQ
ATVNGIAVES ATNTFTDTIP GLSFTASQIT TAPVEVAVGS DTETLKKNIQ DFVNAYNGLN
DLLGASTKYD SASKTAGALQ GDGTTVALQN TLRSMIASTA EGTGAFQRLA DIGIDIKTGG
KLEVSADKLD AALKNPEALK ALFATNVGSG SQANGLAVKM KALADQMLLP EGLLDNKASA
LGASIKRNKS DQDRVDERAS IMEKRLRAQY TALDAKMASL SGLGAYVGQQ VSQWNRTNN
|
|---|
| |