Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ajs_3712 |
Symbol | |
ID | 4672726 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidovorax sp. JS42 |
Kingdom | Bacteria |
Replicon accession | NC_008782 |
Strand | + |
Start bp | 3932931 |
End bp | 3933740 |
Gene Length | 810 bp |
Protein Length | 269 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 639840744 |
Product | ABC transporter |
Protein accession | YP_987899 |
Protein GI | 121596003 |
COG category | [G] Carbohydrate transport and metabolism [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1682] ABC-type polysaccharide/polyol phosphate export systems, permease component |
TIGRFAM ID | [TIGR01291] ABC-2 type transporter, NodJ family |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCCACGC CCACCACGCC CAGCCCCTGG CGCGCGCCCG ACCTGTCGAT GCGCTGGTGG CCCGTGTTTC TGCGCAACCT GCTGGTGTGG CGCAAGCTGG CGGTGCCCAG CCTGCTGGGC AACATCGCCG AGCCGCTGAT GTGGCTGGTG GCCTTCGGCT ACGGCATGGG GGCGCTGGTG GGACAGGTGC AGGTGGGCGG GCAGAACGTG CCCTACATCC TGTTCCTGGC CAGCGGGTCG ATCTGCATGA GCGCCATGAA TGCGGCCAGC TTCGAAGCGC TGTACTCGGC CTTCTCGCGC ATGCATGTGC AAAAGACCTG GGACGGCATC ATGAACGCCC CCATCAGTCT GGACAGCGTG CTGCTGGCCG AGATGCTGTG GGCCGCATTC AAGGCGCTGT TCACCACCAC CGCCATCCTG GGGGTGATGC TCGCGCTGGG CATCAGCTAC AGCCCCAAGC TGATCGTGGC CTGGCCCGTG CTGCTGTGCG TGGGCATCAT GTTTTCCAGC ATCGCGCTCA TCTTCAATGC GCTGGCCAAG GGCTATGACT TCTTCACCTA TTACTTCACG CTGGTGCTCA CGCCCATGAT GTTCCTGTCG GGTGTTTTCT TCCCGCGCGA ACAGCTGCCC ACGGCCATAC GCCTCGCCTC GGACTGGCTG CCGCTCACCA ATGCCGTGGA GCTGGTGCGC CCCCTCTTCA TGGACCAGTG GCCGCAGCAC CCGCTGCGCC ACGGCCTGGT GATCGCCGTG ACCACCGTGG CCGCGTACTG GGTGGCCCTG GCGCTCACCC GCAAGCGCTT TCGCGCCTGA
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Protein sequence | MPTPTTPSPW RAPDLSMRWW PVFLRNLLVW RKLAVPSLLG NIAEPLMWLV AFGYGMGALV GQVQVGGQNV PYILFLASGS ICMSAMNAAS FEALYSAFSR MHVQKTWDGI MNAPISLDSV LLAEMLWAAF KALFTTTAIL GVMLALGISY SPKLIVAWPV LLCVGIMFSS IALIFNALAK GYDFFTYYFT LVLTPMMFLS GVFFPREQLP TAIRLASDWL PLTNAVELVR PLFMDQWPQH PLRHGLVIAV TTVAAYWVAL ALTRKRFRA
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