Gene Ajs_3587 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAjs_3587 
Symbol 
ID4672946 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax sp. JS42 
KingdomBacteria 
Replicon accessionNC_008782 
Strand+ 
Start bp3784415 
End bp3785023 
Gene Length609 bp 
Protein Length202 aa 
Translation table11 
GC content70% 
IMG OID639840619 
Producthypothetical protein 
Protein accessionYP_987775 
Protein GI121595879 
COG category[S] Function unknown 
COG ID[COG1238] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value0.428384 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTGCGCC CGCGGGTGGC GACGCAGCCA GCGCACCGCT GCCCCTACAC TTGCAGCCCT 
GCTATGGAAA TCTGGATGCA CCAACTGCTG GACCTGCTGG CTCTGCCCCA ATTCGGCCTG 
AGCACGGTGT TCATCGTGGC CTTCATCTCC GCCACGCTGC TGCCCGTGGG CTCGGAGCCG 
GCGGTGTTCG GCCTGGTCAA GCTGAACCCC GAACTGCTCT GGCCTGCGAT CCTGGTGGCT 
ACGGCCGGCA ACACGCTGGG CGGCGCGGTC AGCTGGTGGA TGGGCCTGGG CGCGCACCGC 
GCCTGGGACG CCGCTCGCCG GCACCGCCAT GCGCGCCATG CCGATGCCCC CGCCAAGCCC 
ACCCGCGAAC TGAGCCGCAC CGAACGGCGC GCCCGCGTGT GGCTGCGCCG CTGGGGGCCC 
AAGACCTGCC TGCTGAGCTG GCTGCCCGTG GTGGGCGACC CGCTGTGCGC CGTGGCCGGC 
TGGCTGCGCA TGCCGTTCTG GCCCTGCCTA CTCTACATGG CGATTGGCAA GTTCTTCCGC 
TATGCCAGCA TGACGGCCGG CCTGCTGTAC CTGGTGCCGG GCGACTGGGT ACGCTGGCTG 
CATCCCTGA
 
Protein sequence
MLRPRVATQP AHRCPYTCSP AMEIWMHQLL DLLALPQFGL STVFIVAFIS ATLLPVGSEP 
AVFGLVKLNP ELLWPAILVA TAGNTLGGAV SWWMGLGAHR AWDAARRHRH ARHADAPAKP 
TRELSRTERR ARVWLRRWGP KTCLLSWLPV VGDPLCAVAG WLRMPFWPCL LYMAIGKFFR 
YASMTAGLLY LVPGDWVRWL HP