Gene Ajs_3510 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAjs_3510 
Symbol 
ID4671427 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax sp. JS42 
KingdomBacteria 
Replicon accessionNC_008782 
Strand
Start bp3705119 
End bp3706462 
Gene Length1344 bp 
Protein Length447 aa 
Translation table11 
GC content66% 
IMG OID639840542 
Productmulti-sensor signal transduction histidine kinase 
Protein accessionYP_987699 
Protein GI121595803 
COG category[T] Signal transduction mechanisms 
COG ID[COG4585] Signal transduction histidine kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTTGGT CCCGTTTGCG CAAGATCGCC GTCAGTCTGC CGCTGGCATT GCTGGCTGTG 
GCCCTGCTGG TCGGCATCAA CGAAACCGGG TACATGCGCT CGCACGCGGC CGTGGGCGAC
CTGGCCCGCT CGCACGCCAC GCGCGCTGCG CTCGACCGGC TTCTGCAGAA CATGCTCAAC
GCCGAGACAG GGCTGCGCGG CTACCTGCTC ACCGGCGACG AGCGCTATCT GCAGCCCTAC
GAGCAGGCGG TCGCCACCAT CAATACCAAC CTTGATGAGC TGCGCCAGAC CTACCGGCGC
GCACCGCAGG ACCTGGACGA CTTTTCCCAG CTGTCGCAGC AGATCACGCG CAAGCTTTCC
GAACTCGACC TCAGCCTCAA GCTGCGCCGC CAGGACAACG ACGACGCCTG GAAGTTCGTG
CTCTCCACCG ACGTGGGCAA GGAGAACATG GATGCCATTC GGGCGATCGC AGCCCGACTG
GTGGCGCGCA GCGCCCAGCA AACGGAACGC AGCACGCAGG AGATCCTGCA TTCGCTGATG
CTCTCGCGCA TCGGCATCGC CGCCGTGGCG GTGGTGGGGC TGCTGGCGTT CTACCTGTAC
CTGCGCCAGA CCAGCGCCTT GCAGGCTGCG CATGCGCGCG AGCAGGAGGT GTTGGCGCGC
GAACGCGACC GACTGGAGCA GTTGGTACGT GAACGCACTG CCGCGCTCTC CGAGTTGGCC
AGCCATCTGC AGCAAGTACG CGAGGAAGAG CGCGCACACC TGGCGCGCGA GCTGCACGAC
GAGCTGGGTG CTTTGCTCAC GGCCGCCAAG CTGGACGTGG CGCGCCTGAA GTCGCGCATC
GATTTGCACA CCCCCGAGAA CGCCGAGCGC GTGCAGCACC TCACCGAAAC GCTCAACAGC
GGCATCGCGC TCAAGCGGCG CATCATCGAG GACCTGCGCC CTTCGTCGCT CTCCAATCTC
GGGCTCACCA CGTCGCTGGA AATCCTCACG CGCGACTTCG CGCAGCGCAG CAACCTGCAG
ATAGACACCA GCCTGGAGTC CGCCAAGCTG TCCGACGCAG CGCAGCTCAC CGTCTACCGG
CTGGTGCAGG AGTCCCTGAC CAACATCAGC AAATACGCCA ACGCGCGCAA GGTGCTGGTG
TCGGTCCACA GCTATCCCAA CCATGTATCG GTACAGGTGC GGGATGACGG CGACGGGTTC
GACATCTCAA GCATCGCCCC CGACGCGCAT GGTCTGTTCG GCATGCGCCA CCGTGTCGAG
GCGGCGGGCG GCAAGCTCAC GGTCACGTCC ACGCCCGGCG AGGGCACCCT GGTCAGCGCC
GTGCTGCCGC ACACGCTCAC CTGA
 
Protein sequence
MSWSRLRKIA VSLPLALLAV ALLVGINETG YMRSHAAVGD LARSHATRAA LDRLLQNMLN 
AETGLRGYLL TGDERYLQPY EQAVATINTN LDELRQTYRR APQDLDDFSQ LSQQITRKLS
ELDLSLKLRR QDNDDAWKFV LSTDVGKENM DAIRAIAARL VARSAQQTER STQEILHSLM
LSRIGIAAVA VVGLLAFYLY LRQTSALQAA HAREQEVLAR ERDRLEQLVR ERTAALSELA
SHLQQVREEE RAHLARELHD ELGALLTAAK LDVARLKSRI DLHTPENAER VQHLTETLNS
GIALKRRIIE DLRPSSLSNL GLTTSLEILT RDFAQRSNLQ IDTSLESAKL SDAAQLTVYR
LVQESLTNIS KYANARKVLV SVHSYPNHVS VQVRDDGDGF DISSIAPDAH GLFGMRHRVE
AAGGKLTVTS TPGEGTLVSA VLPHTLT