Gene Ajs_3494 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAjs_3494 
Symbol 
ID4673274 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax sp. JS42 
KingdomBacteria 
Replicon accessionNC_008782 
Strand
Start bp3690954 
End bp3691334 
Gene Length381 bp 
Protein Length126 aa 
Translation table11 
GC content63% 
IMG OID639840526 
Productaspartate alpha-decarboxylase 
Protein accessionYP_987683 
Protein GI121595787 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0853] Aspartate 1-decarboxylase 
TIGRFAM ID[TIGR00223] L-aspartate-alpha-decarboxylase 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.243185 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTACCGCA CCCTGCTCAA GTCCAAGATC CACCGTGTGA AGACCACGCA CTGCGAGTTG 
CACTACGAAG GCTCGTGCGC CATCGACGAA GACCTGCTGG AGGCCGCCAA CATCTGCGAG
AACGAACAGG TGCACATCTG GAACGTGGAC AACGGCGAAC GCTTCGTCAC CTACGCCATC
AAGGGCCAGC GCGGCAGCGG CATGATCTCG GTGAACGGAT CGGCCGCGCG CCGCGCCTGC
GTGGGCGACC TGCTCATCAT CGCGGCCTTC GCCCAAGTGG CAGAAGCCGA CGTGGCCGCA
CACCAGCCGC AACTGGTGTT CGTGAACGAC CAGAACCGCC AAGTGGAACT GCGCCACCAC
GTACCCACGC AGGCACTTTG A
 
Protein sequence
MYRTLLKSKI HRVKTTHCEL HYEGSCAIDE DLLEAANICE NEQVHIWNVD NGERFVTYAI 
KGQRGSGMIS VNGSAARRAC VGDLLIIAAF AQVAEADVAA HQPQLVFVND QNRQVELRHH
VPTQAL