Gene Ajs_3479 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAjs_3479 
Symbol 
ID4674214 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax sp. JS42 
KingdomBacteria 
Replicon accessionNC_008782 
Strand
Start bp3674168 
End bp3675238 
Gene Length1071 bp 
Protein Length356 aa 
Translation table11 
GC content73% 
IMG OID639840512 
Productselenophosphate synthase 
Protein accessionYP_987669 
Protein GI121595773 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0709] Selenophosphate synthase 
TIGRFAM ID[TIGR00476] selenium donor protein 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.160372 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value0.547237 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATGCTT CCGCCCCCAC CGCCGCCCCT TCCCATCCGC GCCTGACCTC GCTGTCGCAT 
GGCGGCGGCT GCGGCTGCAA GATCGCGCCG GGCGTGCTGT CGCAGATCCT GCAGCAAAGC
GGCGCGGGCG CCGTCATGCC GCCCGAATTG ATGGTGGGCA TCGAGACCTC GGACGACGCG
GCCGTGTACC GCCTGAACGA GAGCCAGGCG CTGGTGGCTA CCACGGACTT CTTCATGCCC
ATCGTGGACG ACCCATACGA GTTCGGCCGC ATCGCTGCCA CCAACGCGCT GTCCGACGTG
TACGCCATGG GCGGCAAGCC CATCATGGCG CTGGCGCTGG TGGCCATGCC GGTGAACACG
CTGCCGCTGG ACGTGATCGG CGCCATCGTG CGCGGCGGGC AGGACGTGTG CCGCGCGGCG
GGCATCCCGA TCGCGGGCGG CCACACCATC GACTCGGTCG AGCCCATCTA CGGCCTGGTG
GCCATGGGCC TGGTGCACCC GGACCGGGTG CGCCGCAACG CCGGCGCCCA GCCGGGCGAC
GTGCTGGTGC TGGGCAAACC GCTGGGCGTG GGCGTGTATT CGGCCGCGCT GAAGAAGGAG
CAACTGGCCG ACGCCCACTA CCGCGAGATG ATTGCCGCCA CCACGCGCCT GAACACCCCC
GGCCCGCTGC TGGCCGAGCT GCCCGGCGTG CACGCCATCA CCGACGTGAC GGGCTTCGGC
CTGGCCGGCC ATGCGCTGGA GGTGGCGCGC GGCGCCGGCG TCACGGTGCA GATCGACTGG
TCGCGCGTGC CGCTGCTGCC CGGCGTGGCG GACCTGGCCG CGGCGGGCTT CGTGACCGGC
GCCAGCGGCC GCAACTGGGC CGGCTATGGC GAGGGCGTGG CGCTGTCCGC CGGCCTGCCA
GCCACCGCAC AGGCGTTGGT GACGGACCCG CAGACCTCGG GCGGCCTGCT GGTGGCCTGC
GCGCCGGACA GCGTGCAGGA CGTGCTCGCG GTGTTCGCGC GCGAGGGCTT CGCGCAGGCG
GCGGTGATCG GCAGCGTGCA GGCGGGGCCG GCACGGCTGG AGCTGCGTTG A
 
Protein sequence
MNASAPTAAP SHPRLTSLSH GGGCGCKIAP GVLSQILQQS GAGAVMPPEL MVGIETSDDA 
AVYRLNESQA LVATTDFFMP IVDDPYEFGR IAATNALSDV YAMGGKPIMA LALVAMPVNT
LPLDVIGAIV RGGQDVCRAA GIPIAGGHTI DSVEPIYGLV AMGLVHPDRV RRNAGAQPGD
VLVLGKPLGV GVYSAALKKE QLADAHYREM IAATTRLNTP GPLLAELPGV HAITDVTGFG
LAGHALEVAR GAGVTVQIDW SRVPLLPGVA DLAAAGFVTG ASGRNWAGYG EGVALSAGLP
ATAQALVTDP QTSGGLLVAC APDSVQDVLA VFAREGFAQA AVIGSVQAGP ARLELR