| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ajs_3467 |
|---|
| Symbol | |
|---|
| ID | 4674280 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidovorax sp. JS42 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008782 |
|---|
| Strand | - |
|---|
| Start bp | 3661608 |
|---|
| End bp | 3663707 |
|---|
| Gene Length | 2100 bp |
|---|
| Protein Length | 699 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 639840500 |
|---|
| Product | 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein |
|---|
| Protein accession | YP_987657 |
|---|
| Protein GI | 121595761 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1145] Ferredoxin |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 4 |
|---|
| Plasmid unclonability p-value | 0.0324842 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 24 |
|---|
| Fosmid unclonability p-value | 0.270074 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCCAAGA CGCTGATATG CGATTGCAAC CGGACCATGC CTCTGGACCC CAGGGCACTG
GGAACGGCTC TGCATGAGGA GCTGACGCTC CACTCCACCC TGTGCCGCCG CGAGGCCGGC
GCCTTCCAAC AGGCCGTGCG CAGCGGCGAG ACGGTGCTTG TCGCCTGCAC CCAGGAACAA
CGCCTGTTCA CCGAACTGGC CGAGCAGACC GAAGGGGCCA CTTCGCCCCT GCGCTTCGTC
AACATTCGCG AGACTGGCGG CTGGAGCCGC GATGCGCGCC AGGCCGGCCC CAAGATCGCT
GCGTTGCTGG CGGCGGCCCA TCTGCCAGAG CCCGAGCCTG TGCCCACCGT GAGCTTTCGC
AGTGGTGGAC GTCTGCTGAT CATCGGCGCG CTGGATGCCG CCGAGCGTGC GGCCACGCTG
CTGGCCGACG TGCTGGACGT GACGCTGTTC GCGCAAGGCC CCGGTGATGC CGGTGGCCGG
CAAGAGCGGC GCTTTCCCGT GCTGGGCGGG CGCGTTGTGT CACTCAAGGG TTGGCTGGGG
CGATTTGCGC TGCAATGGAC GGCGGACAAC CCCATCGACC TGGACCTGTG CACGCGCTGC
AATGCCTGCG TGACCGCCTG CCCCGAGAAC GCCATCGGGC TCGATTACCA GATCGACATG
ACGGCCTGTA CCGGCCACCG CGATTGCGTG AAGGCCTGCG CGGTGGCGGG TGCCATCCGC
TTCGAGCGCG AGGCCGAGGT GCAGTCGCAG GACTTTGATC TGGTGCTGGA CCTGCGCCCT
GCCGGCGCCG GGCCCACCTT TTTGCAGCAC GCGCTGCCGC AGGGGTACTT CCGCTGGGAC
GGGCAGGACC TGCAGGCGCT GCTGCGCCTG CGCGACCTGG TGGGTGAATT CGAGAAGCCC
AAGTTTTTCA GCTACCGCCA GAAGCTCTGC GCCCACAGCC GCAACCGTGG GGTGGGCTGC
AATGCCTGCG TGGACATCTG CTCGGCCGAG GCCATCAGCA GCGACCCCGT GCGCCAGCAG
GTGGTGGTCA ATCCACACCT GTGCGTGGGC TGCGGCGCCT GCACCACGGT CTGCCCCACG
GGCGCCATGG GCTATGCCTA CCCGTCCGCG CAGGACATGG GCACGCGCAT CCGTACCCTG
CTGTCCACTT ATGCCCAGGC CGGCGGCCGC CAGCCCAGCC TGCTGCTGCA CAGCCAGGAG
AGCGGGCAGC AGCTCGTGCA TGAACTGGGG CGCGCGGCCC AACTGGGCGT GGCCCAGGGC
GTGCCCGCGC ACATGATCCC CGTGGCGCTG TGGCATACAG CCAGTGTCGG TATCGATCTG
TGGCTCAGTG CCATCGCGCA GGGGGCGACA CAGGTGGCGG TGCTGTTCAC GGGGGACGAG
GCACCGCAGT ACGTGGAAGG CCTGCAGTCG CAGATGGCGG TGGCGCAGGC GTTGTTGCAC
GGCCTGGGCT ATACGGGCAC GCATCTGCAT TGCGTGCATG CGCGCTCCGC GACCGATCTG
GATGCGGGGC TGCGCGCGAT CGGCGGCGCG TGTGGCAGCG TACCGGCGCA GGCCGCCCGC
TTCACGCCGA CCAATGACAA GCGCGCCACG CTGGAGCTGG CGCTGGATCA CCTGGTGACC
AATGCCCCCG CGCGCGAGTT GCCCGAGGCC ATTGCGCTAC CCCAGGGGCC ATCTCCGTGG
GGTACGGTGG TCGTGGACAA GGACCGCTGT ACGTTGTGCC TGAGCTGCGT GAGCGCCTGC
CCCGCCGGCG CGCTGCAGGA CAATCCGCAG GCACCGCAGC TGCGCTTCAC TGAGCAGAAT
TGCGTGCAAT GCGGCCTATG CGAGCGCACT TGCCCCGAGA ACGCCATCGC GCTGCAGCCG
CGCATGCTGC TCACGCCGGA GCGCGGCCAG CCGCGCGTGC TGAACGAGAC CCAGCCCTAT
GGCTGCATCC GCTGCGGCAA GCCTTTCGGC ACGCTGCAGG CCATCGAGGC CATGCTGGGC
AGGCTGGCCG ACCACCCGAT GTTCCAGGGC GAGGCGCTGG AACGCCTCAA GATGTGCGGC
GACTGCCGCG TGATTGACCT GTACTCCGCC CAGAACGAAG CGAAAGTGAC CGACCTGTGA
|
|---|
| Protein sequence | MPKTLICDCN RTMPLDPRAL GTALHEELTL HSTLCRREAG AFQQAVRSGE TVLVACTQEQ
RLFTELAEQT EGATSPLRFV NIRETGGWSR DARQAGPKIA ALLAAAHLPE PEPVPTVSFR
SGGRLLIIGA LDAAERAATL LADVLDVTLF AQGPGDAGGR QERRFPVLGG RVVSLKGWLG
RFALQWTADN PIDLDLCTRC NACVTACPEN AIGLDYQIDM TACTGHRDCV KACAVAGAIR
FEREAEVQSQ DFDLVLDLRP AGAGPTFLQH ALPQGYFRWD GQDLQALLRL RDLVGEFEKP
KFFSYRQKLC AHSRNRGVGC NACVDICSAE AISSDPVRQQ VVVNPHLCVG CGACTTVCPT
GAMGYAYPSA QDMGTRIRTL LSTYAQAGGR QPSLLLHSQE SGQQLVHELG RAAQLGVAQG
VPAHMIPVAL WHTASVGIDL WLSAIAQGAT QVAVLFTGDE APQYVEGLQS QMAVAQALLH
GLGYTGTHLH CVHARSATDL DAGLRAIGGA CGSVPAQAAR FTPTNDKRAT LELALDHLVT
NAPARELPEA IALPQGPSPW GTVVVDKDRC TLCLSCVSAC PAGALQDNPQ APQLRFTEQN
CVQCGLCERT CPENAIALQP RMLLTPERGQ PRVLNETQPY GCIRCGKPFG TLQAIEAMLG
RLADHPMFQG EALERLKMCG DCRVIDLYSA QNEAKVTDL
|
|---|
| |