| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ajs_3432 |
|---|
| Symbol | |
|---|
| ID | 4674476 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidovorax sp. JS42 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008782 |
|---|
| Strand | + |
|---|
| Start bp | 3624648 |
|---|
| End bp | 3625283 |
|---|
| Gene Length | 636 bp |
|---|
| Protein Length | 211 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 639840466 |
|---|
| Product | Sua5/YciO/YrdC/YwlC family protein |
|---|
| Protein accession | YP_987624 |
|---|
| Protein GI | 121595728 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0009] Putative translation factor (SUA5) |
|---|
| TIGRFAM ID | [TIGR00057] Sua5/YciO/YrdC/YwlC family protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 34 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCCCAAT ATTTCGAGAT CTACGCCGAC AACCCGCAGC CGCGCCTGCT CAAGCAGGCC
GCCACGCTGC TGTCGAGCGG CGGCATCCTG GCCGTGCCCA CCGACTCCAG CTACGCGCTG
GTCTGCCGCC TGGACGACAA GGACGCCGTG GACCAGATTC GTCGTATTCG GCAGATCAAC
GACAAGCACC ACCTCACCCT GCTGTGCCGC GACCTGTCGG AACTGGCCAA TTACGCGCAT
GTGGACAACC GCCAATATCG CCTGCTGAAG TTGGCCACGC CGGGGCCTTA CACCTTCATC
CTGGACGCCA CCAAGGAAGT GCCGCGCCGC GTGAGCCATC CGCAGCGCAA GACCATCGGT
CTGCGCGTGC CCGACCGCAA GGGCCTGCAG ATGCTGCTGG AGCTGCACGG CGCGCCGCTG
CTGGCCACCA CACTGATCCC GGCGGGCGAA AGCGAGCCGC TGAACGACCC GCAGGAGATC
CGCGAGCGCT TTGAAAAGCA GCTCGATGGC ATCCTCGATG CGGGCGGCTG CCCGCTGGAG
CCCACTACGG TACTGGACCT CACGCCCATG AATACCGGCG GCGACCCCAT CGTGGTGCGC
GAAGGTGGCG GCAGCCTGGC CAAGCTGGGG CTTTAA
|
|---|
| Protein sequence | MAQYFEIYAD NPQPRLLKQA ATLLSSGGIL AVPTDSSYAL VCRLDDKDAV DQIRRIRQIN
DKHHLTLLCR DLSELANYAH VDNRQYRLLK LATPGPYTFI LDATKEVPRR VSHPQRKTIG
LRVPDRKGLQ MLLELHGAPL LATTLIPAGE SEPLNDPQEI RERFEKQLDG ILDAGGCPLE
PTTVLDLTPM NTGGDPIVVR EGGGSLAKLG L
|
|---|
| |