| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ajs_3407 |
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| Symbol | |
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| ID | 4674638 |
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| Type | |
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| Is gene spliced | No |
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| Is pseudo gene | Yes |
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| Organism name | Acidovorax sp. JS42 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008782 |
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| Strand | - |
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| Start bp | 3598311 |
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| End bp | 3601003 |
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| Gene Length | 2693 bp |
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| Protein Length | |
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| Translation table | |
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| GC content | 70% |
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| IMG OID | 640068423 |
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| Product | |
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| Protein accession | |
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| Protein GI | |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG5001] Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 37 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGCCCA TGCCCGGCAG GCGCCTGCAC CTGATCACCT GGGGGGTGGT GGCTGCGCTG
CTCGCAGGGC TGGCGGTGGC GGTGGCCGTG CTGCTGTGGC ATACGCGCGC GGACGCGCTG
GACGTTGCCG AGGCGCGCGT CACCCGTTTT GCCGCGGGGG CGGAGGCGGG CATGAACCGC
ACGCTGCTCT CTTTCGACGT GCTGTTGGCG CATACGGAAG AGCTGCTGGC CCTGCGCGCA
CGCGACCGTG CGGGCCTTGA CGTGGCGGCG GCCGACACGC TGCTGCGCGG CGTGGCGCGG
CAGAACCTCC TGCTGCGCTA CGTGGCGCTG CTCGATGCGC GGGGCGCCGT GCTGGCATCC
TCGGCGTCCA CCGGCGAACT GGACGGCGTG GAGCTGCCCG AGGGCTTCCT AGCGGCCGCC
CTCGCGCCCG CGGTGGCCAC GCTGTCCGTC AGCCAACCCG TGGTGAGTCC TACCAGTTCC
GAGCGGGTGC TGTACATGGC GCGCCAGCTG CGCATGGGCG ACGGCACGCC GCTGCTGGCC
GTCGCGCAGG TGCCGACGGA AGCACTGGTG GCGGTGCTGA TGCAGGGGTT GGACGTTCCT
GACATGGAAG TGACGCTGGA GCGCACGCAA GGCGTGCTGC TGCTGGGCGT GGAGGCGCCA
CAGGGGACTG TGGAGCGCCA GGAGCGCGCA GCGCCGGCCC TGCAGGAAGG CAGCGCGGAC
GATGGCGTGC ACGCATGGCA GGCCAGCGCA CGGCTGTCGG GCAAGCCGGC CATGGTGGTG
GCGCGTCCGC TCATCTACCC CGATCTGTGG GCCACCGTCA GCCTGCCGCG CGACGCGGCG
CTGGCGGGCT GGCGGCAGGA GGCGCTGACG GTGCTGTTCG GCGCGCTGCT GTTTGCGGCC
ACGGTGGTGG CCGCGGGAAG CGTGGTCGCC CTGTACCTGC GGCGCATGCA CAGTGCGCGG
CGGGTGGTGG CGCGCTCCAA GGCCACGCTG GACCAGGCGC TCGAAGCCAT GGTGAGCGGC
TTCGTGTTGC TGGACGCACA GCGCTGCGTG GTGCAGTGGA ACCTGCGCTT CGAGGAGATG
TTCCCCTGGC TCGTCGGCAC CATCGGGGAG GGCGTGCCGT TTCGCCGCGT ACTGGAGACG
ACTGTGCACT ACCACCTGCC CGGCGCCAGC GCGGAGGAAA AGCGCGCGTG GGTGGAGGAG
CGCCTGCAGC AGCAGTGCAC GCCGCGAGGC GGGGTGGAGC AGCTTTTGCC CAATGGCCAT
TACGTGCAGA TCACCGAGCG CGCCACGGCC GATGGCGGCG TGGTCATCAT CTACCACGAC
GTGACCGACC TGCGGCTGGC CACGGCCGAA GTGGAACACC TGGCGTTCTA CGACCAGCTC
ACCGGCCTGC CCAACCGGCG CCTGCTGCTG GATCAGCTGG GCGATGCCAG CGCATCGGCG
GTGCGTACGG GCACGCATGG CGCGGTGCTG TTCATCGACC TGGACCATTT CAAGACCCTC
AACGACACCC TGGGCCACGA GATCGGGGAC TACCTGTTGC AGCAGGTGGC CCGCCGCCTG
GAAAGCGGCG TGCGCGTGGG CGACATCGTG GCGCGCCTGG GCGGGGACGA ATTCGTGGTG
CTGCTGGCCG GCCTGGCGAC CGAGGCAGAA CGCGCCCGCG AGCAGGTGCG CGCTGTGGCC
GAGAAGGTCG TGCAACTGCT GGCGCAGCCC TATCCGATCG CGGGACAGAG CTACCACGGC
AGCTGCAGCG TGGGCGCCGC GCTGTTCGGC AGCGTGCTGC AGACCGCGGC CGAAGTACTC
AAGCAGGCGG ACATCGCCAT GTACCAGGTC AAGGCGCAGC GCGGCAACGC GGTGTGCTTC
TTCGACCCTC GCATGCAGGT GGCGCTGAGC GCGCGTGCGC GGCTGGAGTC GGACCTGCAG
GATGCGCTGC GCGAAGGGCA GTTCCTGCTG CACCTGCAGC CCCAGTTCAC GCGCGACGGC
GCCGTTGTGG GGGTCGAGGC GCTGCTGCGC TGGCAGCACC CGGAGCGCGG CCTGGTGCTG
CCTGCGGAAT TCATCGGCGT GGCGGAGGAC AGCGAGCTCA TCGTGCCCCT GGGCCGCTGG
GTGCTGGCCA GCGCCTGCGA GCTGCTGGCG CGCTGGCAGG CATCGCCGCG GCTGTGCGAG
CTGTCGCTGA GCGTGAATGT GAGCGCGCGC CAGTTCCGCA GCCCCGACTT CGTGGAGCAG
CTGTCGCAAC TCTTGCTGCG CAGCGGCGCA CCGGCGCACC GGCGCACCGG CTGGAGTTGG
AACTTACCGA ATCCCTGGTG CTGGAGGACG TGGAAGACTC CATCGCCAAA ATGCACCAGC
TGCGCACCAA GGGTGTGCGT TTCGCCGTGG ACGATTTCGG CACGGGCTAC TCTTCACTGG
CCTACCTCAC GCGGCTGCCC TTGCATCGGC TGAAGATCGA CCGCACTTTC GTGCACCACC
TGGGCGAGAG TCGCAGCGAC GATGTGGTGG TGCAGACCAT CCTAGGCATG GCGCGCAACC
TGGATCTGGA AGTGGTGGTC GAGGGGGTAG AGACAGAGGA GCAGCGCAGC TTTCTCGCGC
TGCATGGCTG CGACGTGTAC CAGGGATACC TGCTGGCGCA CCCCATGCCG GTGGAGGCGC
TGCAGGCCCG CTACGGCGAC GCGCCGCAGG CGCAGCCCAC AGCAGCGCAC TGA
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| Protein sequence | |
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