| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ajs_3366 |
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| Symbol | |
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| ID | 4672911 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax sp. JS42 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008782 |
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| Strand | - |
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| Start bp | 3555809 |
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| End bp | 3556807 |
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| Gene Length | 999 bp |
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| Protein Length | 332 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 639840406 |
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| Product | integron integrase |
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| Protein accession | YP_987564 |
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| Protein GI | 121595668 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG4974] Site-specific recombinase XerD |
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| TIGRFAM ID | [TIGR02249] integron integrase |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 0.341619 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATGCGC CTTCCGTTTC ACGCCCACCC GCCGTGCGAC AGCCGCCTCG GCTGCTGGAG
TCGATGCGTG AGCGCATCCG GGTGCTGCAC TATTCCATTC GCACCGAGCA GGCTTACGTG
GATTGGGCGC GCCGTTTTAT CTTGTTCCAT GACAAGCGCC ATCCGCGCGA GATGGGGGCA
CCGGAGGTCA CCGCTTTTCT GACCCACCTG GCTGTTGAGC GCAATGTGTC CGCCTCTACG
CAGAACCAAG CCAAGGCCGC CATTTTGTTT CTCTACAAAG AGGTGCTGCA GCACGACTTG
CCCTGGCTGG ATGAGATTGT TTCGGCCCGC AAGGCGCGCC GCCTGCCGGT GGTGTTGACA
CAGCGCGAGG TGCGCGAGCT GCTGATGCAC CTGCAGGGCA CGCAGTGGCT GGTTGCCTCG
CTGCTGTACG GCACGGGGAT GCGCATTCTG GAGGCACTGC GCCTGCGCGT GAAGGATGTG
GAGTTCGAAC GGCGTGAACT GATCGTGCGC GAAGGCAAGG GGAACAAGGA TCGTGTGACC
GTCCTGCCCG AGAATCTGAT CACACCGTTG CGCGAGCAGA TGGAGCGTGC CCGTGCGCTG
CACCGCAAGG ACTTGGATGC GGGTCTTGGT GCCGTATGGT TGCCTGATGC GTTGGCCGTG
AAGTACGCGA ATGCAGCCAC GGCCTGGGGG TGGCAGTACG TATTCCCCAG CGCGGTGCGT
TCGGTGGATC CGCGCTCGGG CGTGCAGCGG CGCCATCACC TGCTGGAGCA GTCGGTGCAG
AAGGCCGTGG CGCTGGCAGC GCGCCGCGCG GGCATCGACA AGCCCTGCAC ACCGCATGTG
CTGCGGCATT CTTTTGCCAC CCACATGCTG CAGGCAGGTT ACGACATCCG CACCGTGCAG
GAGTTGCTGG GTCACAAGGA TGTGAGTACC ACCATGATCT ACACCCATGT CTTGAACAAG
GGCGGGCGCG GGGTGTTGAG CCCGCTCGAT ACGCTATGA
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| Protein sequence | MDAPSVSRPP AVRQPPRLLE SMRERIRVLH YSIRTEQAYV DWARRFILFH DKRHPREMGA
PEVTAFLTHL AVERNVSAST QNQAKAAILF LYKEVLQHDL PWLDEIVSAR KARRLPVVLT
QREVRELLMH LQGTQWLVAS LLYGTGMRIL EALRLRVKDV EFERRELIVR EGKGNKDRVT
VLPENLITPL REQMERARAL HRKDLDAGLG AVWLPDALAV KYANAATAWG WQYVFPSAVR
SVDPRSGVQR RHHLLEQSVQ KAVALAARRA GIDKPCTPHV LRHSFATHML QAGYDIRTVQ
ELLGHKDVST TMIYTHVLNK GGRGVLSPLD TL
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