Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ajs_3289 |
Symbol | |
ID | 4674366 |
Type | |
Is gene spliced | No |
Is pseudo gene | Yes |
Organism name | Acidovorax sp. JS42 |
Kingdom | Bacteria |
Replicon accession | NC_008782 |
Strand | - |
Start bp | 3471018 |
End bp | 3472037 |
Gene Length | 1020 bp |
Protein Length | |
Translation table | |
GC content | 69% |
IMG OID | 640068419 |
Product | |
Protein accession | |
Protein GI | |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0564] Pseudouridylate synthases, 23S RNA-specific |
TIGRFAM ID | [TIGR00005] pseudouridine synthase, RluA family |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 32 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAAACACA TTATAGGGGG CAAACCGGCC GCAGGCCGCA CCCCGCCAGA AGCCCCGGCG GCCCGCATCG TCGAGGTCGA CGCCGAATCC GCGGGCCAGC GGCTCGACAA TTTCCTCATC CGCCACCTGA AGGGCGTGCC CAAGACCCAC GTCTACCGCA TCATCCGCAG CGGCGAGGTC CGCCTGAACA AGGGGCGCAC CAGCGCCGAC GCGCGCGTGG CACCGGGCGA CCTGGTGCGT CTGCCCCCCG TGCGCGTGTC CGCCAAGGTG CTGGACAAGG CGGAGCGCCC CGCGCCCGCG CGCGAATTCC CCATCCTGCT GGAAGACGAG CACCTGATCG CCATCGACAA GCCCGCCGGC ACGGCCGTGC ACGGCGGCAG CGGCGTGAGC TTTGGCGTGA TCGAACAGTT GCGCCAGGCG CGCCCGCAGG CGCGCTTCCT GGAACTGGTG CACCGGCTGG ACCGGGAGAC CTCGGGCATT TTGCTGGTGG CCAAGAAGCG CTCGGCGCTC ACACATCTGC AGGACCAGTT CCGCGGGCGC GAGACGGGCA AGACCTATCT GGCGCTGGTC ACCGGCCACT GGCCCGCCAA CAAGAAGGTC ATCGACACGC CGCTGCACAA ATACCTGCAG GAGGATGGCG AGCGCCGCGT GCGCGTGACC ACGCCCGACG ACCCGGACGG CATGCGCTCC GTCACCCTGG TCAAGGTGCG CAGCCAGCTC GCTCCGCGCC CCTTGCAGGG CCTGCCGGCG ATGAGCCTGT TGGAGGTGAC CATCAAGACC GGGCGCACGC ACCAGATCCG CGTGCACCTG TCCTCCCAGG GCCACCCGAT CGCGGGCGAC GACAAGTACG GCGACTTCGA CCTGAACCGG CGCCTGCAGA AGCAAGGCTT GAAGCGCATG TTCCTTCACG CATGGCGGCT ACAGTTTGAC CACCCGGCCA GCGGCGAGCG CCTGGAATTG CGCGCCGAAT TGCCGCCCGA ACTGACCGCT TTTCTTTCCG ACGACCCCGC ACATGCATGA
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Protein sequence | |
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