| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ajs_3173 |
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| Symbol | |
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| ID | 4672929 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax sp. JS42 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008782 |
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| Strand | - |
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| Start bp | 3353152 |
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| End bp | 3355965 |
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| Gene Length | 2814 bp |
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| Protein Length | 937 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 639840215 |
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| Product | tetratricopeptide TPR_4 |
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| Protein accession | YP_987374 |
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| Protein GI | 121595478 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATTTCG CCCCCCGCAT TCTTGCCCTC GCCGTCATGC TGGCCTCCAC GGGCGCCCCG
GCGCAGACCC TGGACCTGGG CCCCGACATC AGTCCGCTGA AGCGGTTCCA GGTCTATCCC
CACATCGACA AGGCCTTCGA TGCGATGGCC CGCGGCGACG GCACGCGCGC GATTGCCGAG
TTGGAACATG CCCACCGGCT CGCCCCAGAG AACACCGCGA TTGCGCTGCA CCTGGCCCAG
GCGTATCAGC GTTTTGGCCA GCCCGCGCGT GCTGCGGCGT TGCTGCGGGC CCAGAGGTCA
CGCCATCCGG GCGATGCGCG CATTGCCCAG GCACTGCGCG AATTGCAGCC CCCACCCGCA
CCCGTGCAGG AAAGCGCCAC GGTCGTCGCG CAGCCCGAGG CAGCACCCGC CGCGCCAGTG
CTCGCCGCTG CGCCTTCCGC GACTGCGCCC GAACCTGCGT CGGAACACGG CACGCCTGCG
GCGGCTCCGG CCATTGCGGC GCCGCCCGAT CAGCTTGCCA AGCCTGCGCC TGCGGTGCGT
GCGCAGCGAC GCATGGCGCA GGTGCCACGG CCTCGGCGGG CCGACGGCGC CCCGGGCTAT
GCCGCTGCCA GCCGTGCCTA CGAAGCGGTG GAGCGTGCAG AGTTGCCCGC CGCCCTGGCG
TGGGCGCGCG AGGCCGCGCA GGCCGCCCCT GCCAATGCTG ACTACCAGCG CCTGCTGACC
TACCTGCTGA TCGAGAACGG GTTGTACGAG GAGGCACAGA CCAAGGCACG GGAAGCGGAA
CTGACTTTCG CCCCGCAAGG CGATACGCAA TGGCAGGCGT TGGGCGACAC CGCGCGGCAG
CGCCACGCCT ATGCGCAGTT CGAAGCCGCA TCGCAAGCGC AACGGCAGGG CCGCGCCAGC
GATGCCCTTG CCCATGCACA GGCGGCAGCG GAACAAGCCC CGGGTGTGCC GGCGTATCGC
CTGCAGTGGG TAGGCCTGCT GTTGGCCGCG GGCCGCCATG CGCAGGCGCA GCAGGTGGCC
GAGCAGGGCC TGGCCCAGGG CGATGGTGCA GCATTGCAGG TTCTGCGCGG CGCGGCGTTG
CAGGCGCAGG GGCAGACGGA CGATGCGGTG CGGGTTTTCG ACGGTGTGAT TGGCAGGCCG
GATCTCGCGC CGCACGAGCA GCAGAACTAC CGGGTGATCG CCGCCGATGC GGCGCTCGCG
GCGCGCCAGC CCGAACGCGC TAAAGCCCTG CTGCAGCCGC TGGCGCAAGG CGGCGCCGTG
GATGTGTCGG GGCGAGAGGC CGAGATACGG GCCGCCACGC GCCGGCCGAT CTCGGCCGCA
TCCCTGCAGA CATTCTCCCT GCGCTTGCCG GTTGTCAATT GCTTTGGCAG CGCCCAGGCG
CCCGGCTGCG AAGTGTGGCC CGGGCAGGAC GCGCCGGACC CCGCGCGTGC CGTGGCGCAG
GAGGCGTTCC GCGCCTATAC CGAGCGCGAC TATGGGCTGG CCGCGGCCAA GGCCGAGGAA
GCCGCGCGGC TGCAGCCTGC GCATTTGCCG TACCGCCTGT TGCGGCTGCA GGCCTTGGTG
GCCGCGGGCC AGGTGGAGCA GGCTCTGCGC GAGGCTGACG ACACCCTGCA GTCGCGCGCC
GACGGGGCAG AGGTGCTGGC CCTGCGCAGC CGGGTGTACC ACGACCTGGG GCGGCGCGAG
CAGGCCTCTG CCGATGCGCG CGCGGCTTTG CAAGCAGGTG GCCTGTCCCT GTCGAGTGAA
ATCAACCTGC TGCTGCAGGA AGGCCGACGC GACGAGGCCG TGCAGCAGTT CGCACACGCG
ATGGCGGGGC CGGATTTCGC GGGCAGCGCA GACCCCGATC TGGCCTACCT CGCTGCCCGG
GTGGGCGACG ATCGCACCGC GCTGGCCGTG TTCGACCGCG CGCACGCCAA CGACGCGCTG
CCGGCCGCCG CGTTACCCGA CGGCGCCTAC ACCGCGAGCC GCCTGGCCGA GAACGACCGC
GCCATCTACT ACCTGCAGCA GACCATTGAC GCGGTGGAGG CCGGACGGCT GGAGCAGACG
CACCGCCAGC AGTTCGCCAC CCGGCGCGAG CTGGCGGACC GCACCCGCAC CTGGGGCATC
AATGCGTTGC TGGGTTACCG GGGCATGTCT CCCGGCTCCA TCTCGCCTGT GCCCGGGCTG
TACCGGGATG CCGCCCAACT GGTGGGGGAG GCCTATTGGC GCCCGCAGGG CTATCGCGAC
GGCAGCTTCT GGGAAATCTA TGGCGGCGTA GTGCAGACGG TCTACAGCCG CCACGGCGGC
ACGAGCGGCA GCGACACCAC GCAAGGCGCG CTGGGCGTGC GCGCCAAGCC TTTGCGCGAC
CACAACCTCG TGTTGTCCGC CGAGCGGCGC ATCCGCATCG GCTCGTTGTC CTTCAGCGAC
TGGCTGCTGC GCGCCGGTTA TTCCTACGGC GTGGGCACCG ACCTGCGCGT GGACGTTCCG
GACTGGTTCA CGTTCAACGT CTATGCCGAG GCGGGGCGGT TCCTGCAGCG CAAGCAGGAC
TACGTGACCT TCGAGGCGCA GGCCGGGCGC AGCTTCCGCA TGGGGGATGC GGACTCGCGC
CTGGTGCTGT TCCCGCACGC AGTGGTGGGT GTGGACTACA ACTCCGCACG CACGGCCGCG
GGCTACAACG GCGCTGCGGG TGCGGGCGTG GGCATCGCGC TGCGCCGCTG GTTCCGGGAG
GACCGCTACA ACGCGCCGCG TTCGTACCTG GACCTGTCGC TGCAGTACCG TGCGCGCCTT
GCGGGCGACG AGCGGGGCAA GGGCGTGTTC CTGCGCGCTG CGCTGGTCTT CTGA
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| Protein sequence | MNFAPRILAL AVMLASTGAP AQTLDLGPDI SPLKRFQVYP HIDKAFDAMA RGDGTRAIAE
LEHAHRLAPE NTAIALHLAQ AYQRFGQPAR AAALLRAQRS RHPGDARIAQ ALRELQPPPA
PVQESATVVA QPEAAPAAPV LAAAPSATAP EPASEHGTPA AAPAIAAPPD QLAKPAPAVR
AQRRMAQVPR PRRADGAPGY AAASRAYEAV ERAELPAALA WAREAAQAAP ANADYQRLLT
YLLIENGLYE EAQTKAREAE LTFAPQGDTQ WQALGDTARQ RHAYAQFEAA SQAQRQGRAS
DALAHAQAAA EQAPGVPAYR LQWVGLLLAA GRHAQAQQVA EQGLAQGDGA ALQVLRGAAL
QAQGQTDDAV RVFDGVIGRP DLAPHEQQNY RVIAADAALA ARQPERAKAL LQPLAQGGAV
DVSGREAEIR AATRRPISAA SLQTFSLRLP VVNCFGSAQA PGCEVWPGQD APDPARAVAQ
EAFRAYTERD YGLAAAKAEE AARLQPAHLP YRLLRLQALV AAGQVEQALR EADDTLQSRA
DGAEVLALRS RVYHDLGRRE QASADARAAL QAGGLSLSSE INLLLQEGRR DEAVQQFAHA
MAGPDFAGSA DPDLAYLAAR VGDDRTALAV FDRAHANDAL PAAALPDGAY TASRLAENDR
AIYYLQQTID AVEAGRLEQT HRQQFATRRE LADRTRTWGI NALLGYRGMS PGSISPVPGL
YRDAAQLVGE AYWRPQGYRD GSFWEIYGGV VQTVYSRHGG TSGSDTTQGA LGVRAKPLRD
HNLVLSAERR IRIGSLSFSD WLLRAGYSYG VGTDLRVDVP DWFTFNVYAE AGRFLQRKQD
YVTFEAQAGR SFRMGDADSR LVLFPHAVVG VDYNSARTAA GYNGAAGAGV GIALRRWFRE
DRYNAPRSYL DLSLQYRARL AGDERGKGVF LRAALVF
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