Gene Ajs_3155 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAjs_3155 
Symbol 
ID4673604 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax sp. JS42 
KingdomBacteria 
Replicon accessionNC_008782 
Strand
Start bp3335823 
End bp3336326 
Gene Length504 bp 
Protein Length167 aa 
Translation table11 
GC content70% 
IMG OID639840197 
Product2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase 
Protein accessionYP_987356 
Protein GI121595460 
COG category[I] Lipid transport and metabolism 
COG ID[COG0245] 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase 
TIGRFAM ID[TIGR00151] 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones40 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGGGCGG CGAACGCAAT GGGCATGAAT TTCAGAATCG GCGAAGGGTG GGACGTGCAT 
GCGCTGGTGC CCGGGCGGCG CCTGGTCATC GGCGGGGTGG AGATCCCGCA CACCATGGGC
TTGCTGGGCC ATTCCGATGC CGATGTGCTG CTGCATGCCA TCACCGATGC GCTGCTGGGC
GCTGCGGCGC TGGGCGACAT CGGCAGCCAC TTCCCCGACA CCGACGCGCG CTTCAAGGGC
GCGGACTCGG TGGCGCTGCT GGAGGAGGCG GCGCGCCGCG TGGGCGACAC GGGCTACGCC
ATCGGCAACA TCGACAGCAC CGTGGTCGCG CAGGCGCCGC GCCTGGCGGC GCACATCCCC
GCCATGCGCG AGCGCATCGC CGGCGCGCTG GGCCTGGTGC TGGACCAAGT GAACGTGAAG
GCCAAGACCG CCGAGCGCCT GGGCCCCGTG GGGCAGGGTC TGTCCATCGA GGCGCGCGCC
GCCGTGTTGC TATTCAAAAA ATAG
 
Protein sequence
MRAANAMGMN FRIGEGWDVH ALVPGRRLVI GGVEIPHTMG LLGHSDADVL LHAITDALLG 
AAALGDIGSH FPDTDARFKG ADSVALLEEA ARRVGDTGYA IGNIDSTVVA QAPRLAAHIP
AMRERIAGAL GLVLDQVNVK AKTAERLGPV GQGLSIEARA AVLLFKK