Gene Ajs_3127 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAjs_3127 
Symbol 
ID4673159 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax sp. JS42 
KingdomBacteria 
Replicon accessionNC_008782 
Strand
Start bp3302205 
End bp3303029 
Gene Length825 bp 
Protein Length274 aa 
Translation table11 
GC content63% 
IMG OID639840168 
Productextracellular solute-binding protein 
Protein accessionYP_987328 
Protein GI121595432 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG2998] ABC-type tungstate transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value0.890784 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAATC ACAAGCGTTT TTGGCCTCTA GCGCTTACAC AGACTGCGGT AGCAGCTATT 
GCTTTGGTAG CGTATGGCAG CGCTGCGGCG CAGGCCATCA CCCTGGCATC GACCACCTCC
ACCGAGCAAT CGGGCCTGTT CACCCACCTA CTGCCGGCCT TCAAGCAGGC CACCGGCATC
GACGTGAAGG TGGTGGCCGT GGGCACCGGC CAGGCGCTGG ACATGGCGCG CCGCGGCGAC
GCCGACGTGC TGTTCGTGCA TGACCAGGTG GCCGAAGAAA AGTTTGTGGC TGACGGCTGG
GGCGTGAAGC GCTACCCGGT CATGTACAAC GACTTCATCC TAGTGGGCGG CAAGGGCGAC
CCGGCCGCCA CCAAGGGCAA CGACATCGCC GCCGCACTCA AGAAGGTTGC CACGGTCAAT
GCCGAGTTTG TCTCGCGCGG CGACAAGAGC GGCACCCACG CCGCCGAGCT GCGCTACTGG
AAGATCGCCA CCGACGGCGT CAAGGGCAAC GGCTACAAAG AGTGCGGCTG CGGCATGGGC
CCGGCGCTGA ACATCGCGGC GTCCAGCGGC GCATACGTGC TATCGGACCG CGGCACCTGG
CTCAACTTCA AGAACCGCGA CAACCTGGCG GTGCTGGTGG AGGGCGACAA GCGCCTGTTC
AATCAGTATG GCGTGATGGT GGTGAACCCC GCCAAGCATC CCCACGTCAA GCAGGCCGAG
GCGCAAAAGT TTGTGGACTG GGTGATCTCG CCCGCCGGCC AGAACGTCAT TGCCAGCTAC
AAGATCAACG GCGAGCAGCT GTTCTTCCCG AATGCCAACC AGTGA
 
Protein sequence
MKNHKRFWPL ALTQTAVAAI ALVAYGSAAA QAITLASTTS TEQSGLFTHL LPAFKQATGI 
DVKVVAVGTG QALDMARRGD ADVLFVHDQV AEEKFVADGW GVKRYPVMYN DFILVGGKGD
PAATKGNDIA AALKKVATVN AEFVSRGDKS GTHAAELRYW KIATDGVKGN GYKECGCGMG
PALNIAASSG AYVLSDRGTW LNFKNRDNLA VLVEGDKRLF NQYGVMVVNP AKHPHVKQAE
AQKFVDWVIS PAGQNVIASY KINGEQLFFP NANQ