Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ajs_3080 |
Symbol | |
ID | 4671937 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidovorax sp. JS42 |
Kingdom | Bacteria |
Replicon accession | NC_008782 |
Strand | - |
Start bp | 3249660 |
End bp | 3250646 |
Gene Length | 987 bp |
Protein Length | 328 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 639840126 |
Product | NAD-dependent epimerase/dehydratase |
Protein accession | YP_987286 |
Protein GI | 121595390 |
COG category | [G] Carbohydrate transport and metabolism [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0451] Nucleoside-diphosphate-sugar epimerases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 0.869195 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCACTTGC CGTTCCCGAA TTCCGATGTC GCTACCGCGC GCGCGCCCCT GGTTGCCGTG ACCGGCGCGA CCGGCTTCAT CGGCCGGCAT CTCATCGCCG CGCTGGTGCA GGCGGGCTGG CGGGTGCGGC TGCTGCTGCG GCGCGAACCG TCCGGCGCCG AATGGCGCCA GTCGACGCCC GAAGTCGTGG CCGGCTCGCT CGACAACGAG GCCGCAGTGG CGCGTCTCGT GGAGGGCGTC GATGCGGTGA TCCATCTGGC CGGACTCATC AAGGCGGCAC GGCGTGCCGA TTTCTTTGCG GTGAACGAGC AGGGTGTCGC GCGGATCGCG CGGGCGACGA AGCAACTGTC GCCCGACGCG CATTTCCTGC TGGTCTCCAG CCTGGCCGCG CGCGAACCGC TGCTTTCCGA CTACGCCGCC AGCAAGCGTG CCGGCGAGGC TGCGGCACTC GACGCGATGG GCGCGCGCGC CACCGTGCTG CGCCCACCGG CTGTCTACGG CCCGGGGGAC CGCGAAACGC TGCGCTTCTT CCAGGTTGCC CGCTGGCCGC GCGTGCCCCT GCTCGGCGGG CCGGACGCGC GCGCCGCGCT GATCCACGTG CGCGACGTGG CCCGGCTGAT CGTCATGCTC GTCGCGTCGA CGCCGCAGGG CCAGGTGCTG GCGGCGGCGG ATGGCCAGCC AGCGGGCTAT CGCTGGGACG AACTGCTCGG TGCCGCGGCG CGGGCGGTCG GCAACCCGAC GCCGCGCTTC CTGCAGGCGC CGCAAGGGCT GCTGCGTGGC ATCGCATGGG TCGGCGATGT GGCGCGCCTC GGCGGCTCGG CGGCCATGCT CAATTCGCAG AAGCTGCGCG AGCTGCGCCA TGCGGATTGG GGCGTTTCGC CGGCCGAACT CGCGCGGCCC GATGGCTGGT CGCCGCAGTT CGACATCGAC ACCGGCTTCG CCGATGCCGT CGCCTGGTAC CGGTCGGCCG GCTGGTTGCC GGGCTGA
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Protein sequence | MHLPFPNSDV ATARAPLVAV TGATGFIGRH LIAALVQAGW RVRLLLRREP SGAEWRQSTP EVVAGSLDNE AAVARLVEGV DAVIHLAGLI KAARRADFFA VNEQGVARIA RATKQLSPDA HFLLVSSLAA REPLLSDYAA SKRAGEAAAL DAMGARATVL RPPAVYGPGD RETLRFFQVA RWPRVPLLGG PDARAALIHV RDVARLIVML VASTPQGQVL AAADGQPAGY RWDELLGAAA RAVGNPTPRF LQAPQGLLRG IAWVGDVARL GGSAAMLNSQ KLRELRHADW GVSPAELARP DGWSPQFDID TGFADAVAWY RSAGWLPG
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