Gene Ajs_3078 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAjs_3078 
Symbol 
ID4671242 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax sp. JS42 
KingdomBacteria 
Replicon accessionNC_008782 
Strand
Start bp3247671 
End bp3248555 
Gene Length885 bp 
Protein Length294 aa 
Translation table11 
GC content70% 
IMG OID639840124 
Producthypothetical protein 
Protein accessionYP_987284 
Protein GI121595388 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.772743 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value0.632907 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCAACG CCGTCTTCAT CCACACCAAC CCCAAGCAGA TCGTCGGCGC CCTGGTGGCG 
CAGCACGCGT TGCGCAGCCG CAGCGCCGCG CCCGAGCGCT TCGACGTGCG CATCCTCCAG
ACGACGGACT TCCCGGCCTT CGAACGCTTC GAGGGTCGCC GCTACCTGCG CGAAGGCCAG
CAGGTGCTGT GGCGCAACGA CGACCTGCAG TCGTTCACGC CGCTGCGCTT CGCCGTGCCC
GAGCAGATGG GCTACGCCGG CCGTGCAGTG CTGATCGACC CCGACATCTT CGCGCTCGGC
GACATCAACG CGCTGCTCGA GCGCGACATG GGCGGTGCCG CCGTGATGGC GCGGCAGATG
GACGGCGACT TCCGCCGCCC GCTGCATTAC GCGTCGAGCG TGATGCTGAT GGACTGCGCG
CGCCTTGCGC ACTGGCAATG GGAAGCGGAC TTCGAACGCA CCTTCCGCAG CGAGCGTGAC
TACCGCGACT GGATGTGGCT GCTGCTCGAG CCGCCCGGCA GCGTCGCGGC GCTGGAGCCC
GAGTGGAACG ACTTCGACCG GCTCACGCCC GAGACCAAGC TCTTGCACAA CACGCACCGC
CGCACGCAGC CGTGGAAAAC CGGCCTGCCC TCGGACTTCA CGCCGCGCGG CACCACGCTC
ACCTCGCGCG CCGGCATCTG GCTGCGCAAG CTGACGGGGC GCGGCGCCGG TCGCTACCGC
CGGCATCCCG ATCCGGCGCA GGAGCGGCTG TTCTTCCGGA TGCTGGGCGA ATGCCTGGAC
AACGGGTCGA TCGACCGCGC CCTGCTCGAC GTCGAGATCG CGCGCGGCCA TGTGCGCAGG
GATGCGATGG ACTGCGTGGC CCGCGCCGCG CACGCCATCG CCTGA
 
Protein sequence
MRNAVFIHTN PKQIVGALVA QHALRSRSAA PERFDVRILQ TTDFPAFERF EGRRYLREGQ 
QVLWRNDDLQ SFTPLRFAVP EQMGYAGRAV LIDPDIFALG DINALLERDM GGAAVMARQM
DGDFRRPLHY ASSVMLMDCA RLAHWQWEAD FERTFRSERD YRDWMWLLLE PPGSVAALEP
EWNDFDRLTP ETKLLHNTHR RTQPWKTGLP SDFTPRGTTL TSRAGIWLRK LTGRGAGRYR
RHPDPAQERL FFRMLGECLD NGSIDRALLD VEIARGHVRR DAMDCVARAA HAIA