| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ajs_3058 |
|---|
| Symbol | |
|---|
| ID | 4670708 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidovorax sp. JS42 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008782 |
|---|
| Strand | - |
|---|
| Start bp | 3226208 |
|---|
| End bp | 3227191 |
|---|
| Gene Length | 984 bp |
|---|
| Protein Length | 327 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | 639840104 |
|---|
| Product | diacylglycerol kinase, catalytic region |
|---|
| Protein accession | YP_987264 |
|---|
| Protein GI | 121595368 |
|---|
| COG category | [I] Lipid transport and metabolism
[R] General function prediction only |
|---|
| COG ID | [COG1597] Sphingosine kinase and enzymes related to eukaryotic diacylglycerol kinase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.891237 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 26 |
|---|
| Fosmid unclonability p-value | 0.426119 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGATCGAGT CGCTGGCGAA CGCCGCGCTG CCGCCGTGCC TCATCGTCAA CCCGCTGAGC
TTTCGCGCCT CGCGCGGCCT GGCCGAGCAG GCGCAGGCCG TGGCGAAGGC GCAGGGCGCG
GAGGTGGTCG TGGTCGACGG GCCCGCATCG CTCACCGCCG CGGTCGAGGC CATCCTGGCC
CGTCGCCAGC GCCACGTGAT GGTGCTGGCC GGCGACGGGA CCGTGCGCGC GGTCATCGAC
CAGCTGGCCA GCCTGCCCAC GGGGGCCTGG ATGCCGGACC TGCTCGTGCT GCCCGGCGGC
CGCACCAACC TGACGGCCGC CGACCTGACA CCGGGTATCG ACGCGATGCG CCTGCTCGAG
CGCGGCCTGG CGGCCGTCGC GGACAAGCGC TGGGATGCTG CCGTCGTCGA GCGCGCCACG
CTGTGCATCG AGCAGGGGCC GGCACCGGCA CGCCGCGGCC TGTGGGTGGG CGCGGCGCTG
ATCGACGGCG TGATCCGCCG CACGCACGCC CACCGCATCG GTGGTGACGG CGCGCTGCGC
ACCGGCCACC TGAGCACGCT GTCGTCGCTG CTGCGCCTGG TGGTTCTCGC GTTGCGCGGT
CGGTCGGGGC TGTCGTGTCC GACATTGCGC ATCGATGCCG GTCCGCTGGG CCGCTTCGAG
GGCAAGGTGA ACCTGCTGCT GGCGACGACG CTGCAGCACC GCCAGGGTTT GTTCGACCCC
TACGCCACGC GCGCCGATGG CGGCATGCGC CTGACGGCCG TGTCGCGCCA TGCCAGCCGC
TTCTACCGCT CGCTGCCGCG CCTGCTCACG GGGCGTTTCT CGCGCGCGAT GGACACCGCC
CACGGCTTCC TCAGCGGCGG CTGTGCGCAG GTCGAGATCA CGGGCCTCGG CGGCTATTCG
CTCGACGGCG AGGCCTACGA CACCGACCCG GCGCGCCCGG TCGTGATCCG TCGCGGCCCC
TCTCTTCGGT TCTTTGCCGC ATGA
|
|---|
| Protein sequence | MIESLANAAL PPCLIVNPLS FRASRGLAEQ AQAVAKAQGA EVVVVDGPAS LTAAVEAILA
RRQRHVMVLA GDGTVRAVID QLASLPTGAW MPDLLVLPGG RTNLTAADLT PGIDAMRLLE
RGLAAVADKR WDAAVVERAT LCIEQGPAPA RRGLWVGAAL IDGVIRRTHA HRIGGDGALR
TGHLSTLSSL LRLVVLALRG RSGLSCPTLR IDAGPLGRFE GKVNLLLATT LQHRQGLFDP
YATRADGGMR LTAVSRHASR FYRSLPRLLT GRFSRAMDTA HGFLSGGCAQ VEITGLGGYS
LDGEAYDTDP ARPVVIRRGP SLRFFAA
|
|---|
| |