| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ajs_2928 |
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| Symbol | |
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| ID | 4673212 |
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| Type | |
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| Is gene spliced | No |
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| Is pseudo gene | Yes |
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| Organism name | Acidovorax sp. JS42 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008782 |
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| Strand | - |
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| Start bp | 3100628 |
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| End bp | 3102973 |
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| Gene Length | 2346 bp |
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| Protein Length | |
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| Translation table | |
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| GC content | 70% |
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| IMG OID | 640068403 |
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| Product | |
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| Protein accession | |
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| Protein GI | |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3843] Type IV secretory pathway, VirD2 components (relaxase) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.292593 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGTCGTCGC CCCTGCAGTG CGAGCGCATC CGCGCTTCAC TTCGCGCTAC CTTCCAACGT
GCAGGCGTCT TGCCTCGAAC GCTGCCGGCC TGCGGCCGTC GCCGCGTTCG CCGGCGCGCT
GGCTGCTCGG GCAGCAGCGC CGCCGGGCCG CCGCTGCCCA GAGCGCCAGC GAGGGGCAAA
GGCGGAAGGC AAGACAAAAG GACGCGGCAC CGGGCCGCGT CGAAAGCCTG TCTGCACGTG
GGGGTTGCGC GGCACGCAGC GGCTTCGCCG CCGTGCCGCG TGGGGCGCGA AGCCCGCGCC
AATCCAGGCA TGTCCGCGTG CTTCGCACGA CCGGACACGC TGGCACTTGC AGGGAACACA
GCCATGACCG ACCGCCGCGA CGACGAGTTC CGCATCCGTC CCAGCGCCCC GAAGAACCGG
GGCCAGGGCT TCATCTCCAA GGTGCTCAAG CAGGCGGGCA AAGCCAGCAG CGGCAAGTCC
TCGGTGCGCC GTCCCGCATC CAGCGGCAGC GGCGCACGCG CTGGCCAGCG GCCCGGTTCG
CGCCTCGGGC GCGGCCACAC GGCGGCGCGC TTCGCCGGCG CGAAGCTGAC GCCCATGTCG
CGGCGCGTGA TCATCAAGAC GCTGCTGGTG AATCAGCGCC AGGCCAGCCC GCAGTCGCTC
GCCAAGCACC TGCGCTACAT CGAGCGCGAC GGCGTGGGCC GTGATGGCGA GCCGGGCCAA
GCCTACGGAC CGCAGGCGGA TGCCGCCGAC CTCGACGCCT TCAAGGAACG CTGCGCCGAT
GACCGGCACC ATTTCCGCTT CATCGTCTCG CCCGAGGACG GCGCCGAACT GGACGACCTG
CGCACCTACA CCCGGCATCT GGTGAGCCGC ATGGAAGCCG ACCTGGGCAC GCGGCTGGAT
TGGGTGGCGG TGGATCACTG GAACACCGAC AACCCGCACA CTCACCTGAT CGTGCGCGGG
CGTGACGACA CCGGCAAAGA CCTCATCATC GCGGGCGACT ACATCGCGCA CGGCTTTCGC
CATCGCGCCG CCGAGCTGGC GACCGAATGG CTGGGGCCAC GCACCGAGCT GGAGATCCAG
CAGACCTTGC AGCGCGAGGT GGCGCAAGAG CGATGGACGA GCCTGGATCG CACCCTGCAA
CGCGAGGCCG GCGAGGACGG CCGAGTGCAG ATCGGACGCT TCAACGAACC GCGGCTGCAA
CGCCAGCGCC TACTGTTGAT CGGTCGCCTG CAACGCTTGC AGCGCATGGG CCTCGCCGAC
GAGATGCAGC CGGGCACCTG GGCCGTCCAT GCCGACGCGG AAAAGACTCT GCGCGCGCTG
GGCGAGCGTG GCGACATCAT CCGCACCATA CAGCGGGCCA TGCGCGGCGA GCCGCGCGAG
CTGGCGGTGT TCGAGCCGAG CGACGATGGC CGAACCATCC TCGGCCGCGT GGCCGCGAAG
GGGCTGGCCG ACGAGCTGCG CGACCGGGGC TATCTGGTCA TCGACGGCGT GGACGGCAAG
GCCCATTACG TCGCGCTGAA CGCCCGCGAC GAGCTGGCGA ACTATCCGAT CGGCGCCGTG
GTGGAAGTGA AGGGATCGGC TGACGTGCGC GCGGCCGACA AGAACATCGC CGCGCTGGCG
AGTGATGGCC TCTACCGTGC CGACCATCAC TTGGCCGTGG CGCAGGGTCA GGCCGTGCCG
GGCCGCGACC CGCACGAAGT CGTAGCAGCC CACGTCCGGC GCCTGGAAGC CCTGCGCCGG
GCCGGCATCG TGGAGCGCGT GACCGAGGGG CTATGGAAGG TGCCGGGCGA TCTGCCCGAG
CAAGGCCGCC AGTACGACGC GCAGCGCCTG GGCGGCGTGG CCGTGGAACT GAAATCGCAC
CTGCCCATCG AGCGGCAGGC CCGCGTGATC GGGTCCACCT GGCTCGACCA GCAGTTGATC
GGCGGCGGCT CGGGCCTGGG CGATCTGGGC TTTGGTGGCG ACGCCAAGCA GGCCATGCAA
CAGCGCGCCG ACTTTCTGGT CGAGCAGGGG CTGGCCGAGC GGCGCGGGCA GCGCGTGATC
CTGGCGCGCA ACCTGCTGGG CACGCTGCGC AACCGGGAGT TGGCACAGGT CGCCAAGGAC
ATTACGGCCG AAACGGGCCT GGAGCATCGC CCCGTGGCCG ACGGGCAGCG CGTGGCCGGT
ATCTACCGCC GCAGCGTCAT GCTCGCCAGC GGGCGCTACG CGATGCTCGA TGACGGCATG
GGGTTCAGCC TGGTACCGTG GAAGCCCGTG ATCGAGCAAC GGCTGGGACA GCAGATTGCC
GCAACGGTGC GCGGTGGTGG CGTGTCGTGG GAGATGGGGC GGCAGCGCGG GCTGTCAATC
AGCTAG
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| Protein sequence | |
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