Gene Ajs_2878 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAjs_2878 
Symbol 
ID4670519 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax sp. JS42 
KingdomBacteria 
Replicon accessionNC_008782 
Strand
Start bp3049165 
End bp3049482 
Gene Length318 bp 
Protein Length105 aa 
Translation table11 
GC content65% 
IMG OID639839935 
Producthypothetical protein 
Protein accessionYP_987095 
Protein GI121595199 
COG category[S] Function unknown 
COG ID[COG4327] Predicted membrane protein 
TIGRFAM ID[TIGR03647] probable solute:sodium symporter small subunit 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.127275 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCCACC GCCGGTCGCT CACGCAGGAA GAGATCGAGG GGGCGCCTTT TGCCCCCGAC 
CTGCACGATG CACGCCACCT GTGGCTGAAG GCGGGCCTGC TGCTCGTGTG GGTGCTGGTG
TCGTTCGGCA CCGGCTACTT CGCGCGCGAC CTGCAATTCC TGGTGGGTCC ATGGCCGTTG
AGCTACTGGA TTGCCTCCCA GGGGGCAGTC CTGATGTTCA TTGGCATCGT CTGCGTTTAC
TGTGCCGCCA TGAGCTACTT CGAACGGCAG GACATGGCGG CGCAGCGCGA CGCTGCCACA
GCCCCACCCC ATGATTGA
 
Protein sequence
MPHRRSLTQE EIEGAPFAPD LHDARHLWLK AGLLLVWVLV SFGTGYFARD LQFLVGPWPL 
SYWIASQGAV LMFIGIVCVY CAAMSYFERQ DMAAQRDAAT APPHD