Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ajs_2845 |
Symbol | |
ID | 4672793 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidovorax sp. JS42 |
Kingdom | Bacteria |
Replicon accession | NC_008782 |
Strand | + |
Start bp | 3018071 |
End bp | 3019237 |
Gene Length | 1167 bp |
Protein Length | 388 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 639839902 |
Product | extracellular ligand-binding receptor |
Protein accession | YP_987062 |
Protein GI | 121595166 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 31 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCAAGC CGTTCATCGT CCACCCTTGT GCGCCGCGCA GGCGGCTGCT GCAATCGCTG TGCGCAAGTG CCTGTGCGCT CGCGTGGCCG GCGCTGGCCC AGCAGCGCTC GGCAGACGCC AAGGCAGCCA TCCTCATCGG GCGCTCCTCG GCACTGTCGG GCCCCATGGC GCCGTTCCTC ACGCCGGTGC ACGAGGGGCA GGAAGCCGCC CTGGCGGACT TCAACGAGGC CGGCGGCGTC GCAGGGCGCA AGGTGCAGCT CGTGTCCCTG GACGACAAGT TCGACGCCGC GCTCGCCCTG GACAACGCCC GCAGACTCGT GCAGGACAGC GGCGTGGTCG CGCTGTTCGG CCAGGCCGGC ACCTCGCAGG TGCTAGCGCT GCTGCCCTAC CTGGCGCAGG CGCGCACGCC GCTGGTGGCC GTCTACACCG GCAGCCCCGC GGTGCACGGC GCGCGCAGCC CCTACCTGTT CACCACCAGC GCCAGCTACG CGGACGAGCT GGTGAAGATC GTGCGCAACC TCGTGGCCAT TCAGACCACG CGCATCGGCG TCGCCTACGA GAACAACGAC TTCGGCAAGC TCGCCCTGCC CCTGGTCGAG AAGGCCATCA CGGCCGAGGG CGGCACCTTC GTGGGCGCCC ATGCCACGCA CAGCAGCGGC CAGGACGCCG AGGCCGCCGC CAAGGCCCTG GCGGCCCTGC GGCCGCAAGC CGTGGTAATG ATTGCCGCGG GCCCGCCCGT GGTGGCCTAC GTGCGCGCCA ATAAGGCGCA CCTGGGCGTG CCGGTGTACA CGCTGTCGCT GGGCGCGGGT GCGCAGGTCA TCCGCGCGCT GGGCAGTGAC GCGCGCGGGC TGGCCGTGGC GCGCACCACG CCGCCGCCCA CGCGGCTGAC CACCGCCGTG GCGCGCGAGT TCCAGGCGTC CATGAAGCGC CACGGCCACC CCGTGGACTA TGACCGCTTC AGGGGCTACC TGGACGCGCG CATCCTCATT GAAGGCCTGC GCGCCTCGGG CCCTTCGGTG ACGGGCGCAT CGCTGGCGGC GACCCTGGAA GGGCTGCACA AGGTGGACCT GGGCGGCTAC ACCTACCAGT ACAGTGCGCA GAACCGCAAT GGCTCCAGCT ACGTGGACAT TGCCGTGATC GGGCCCGACG GCAACTACAT GCACTGA
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Protein sequence | MTKPFIVHPC APRRRLLQSL CASACALAWP ALAQQRSADA KAAILIGRSS ALSGPMAPFL TPVHEGQEAA LADFNEAGGV AGRKVQLVSL DDKFDAALAL DNARRLVQDS GVVALFGQAG TSQVLALLPY LAQARTPLVA VYTGSPAVHG ARSPYLFTTS ASYADELVKI VRNLVAIQTT RIGVAYENND FGKLALPLVE KAITAEGGTF VGAHATHSSG QDAEAAAKAL AALRPQAVVM IAAGPPVVAY VRANKAHLGV PVYTLSLGAG AQVIRALGSD ARGLAVARTT PPPTRLTTAV AREFQASMKR HGHPVDYDRF RGYLDARILI EGLRASGPSV TGASLAATLE GLHKVDLGGY TYQYSAQNRN GSSYVDIAVI GPDGNYMH
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