Gene Ajs_2758 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAjs_2758 
Symbol 
ID4673903 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism nameAcidovorax sp. JS42 
KingdomBacteria 
Replicon accessionNC_008782 
Strand
Start bp2918979 
End bp2920083 
Gene Length1105 bp 
Protein Length367 aa 
Translation table11 
GC content64% 
IMG OID639839814 
Productpeptide chain release factor 2 
Protein accessionYP_986975 
Protein GI121595079 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG1186] Protein chain release factor B 
TIGRFAM ID[TIGR00020] peptide chain release factor 2 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.24568 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAGCAG AACGCATCAA CCTCATCGGC ACCACCCTCG AAGACCTGAC CGAGCGGACC 
CAAGAGCTAC GGAGGTATCT TTGACTACGA TGCCAAGTTC GAACGCCTGC GCACGGTCAA
CGCATCGCTA GAAGACCCGG CTGTCTGGAA CGACCCTAAG AAGGCCCAGG AGCTCGGCAA
GGAAAAGAAG TCGCTCGACG CCGTGGTGCT GACGCTGCAA AAGCTCACCA CCGAGCTGGC
CGACAACGCC GAGCTCTACG AAATGAGCAA GGAAGAAGGC GACGAGGCCG GCCTGACGAC
CATCGAAGCC GAGGCCGAGA AGCTGCGCCC GCTCATCGAG GAGCTGGAAT TCCGCCGCAT
GTTCAGCAAT GAGGCCGACC CGCTGAACTG CTTCGTGGAC ATCCAGGCCG GCGCCGGCGG
CACCGAGGCC TGCGACTGGG CCAGCATGCT GCTGCGCCAG TACCTGAAGT ACGCCGAGCG
CAAGGGCTTC AAGGCCACGG TGGAAGAAGA AACCCCGGGG GACGTGGCCG GCATCAAGAG
CGCCACGATC AAGATCGAGG GCGAGTACGC CTACGGCCTG CTGCGCACCG AGACCGGCGT
GCACCGCCTG GTGCGCAAGT CGCCGTTCGA CTCGTCGGGC GGGCGCCACA CATCGTTCGC
CTCGCTGTTC GTCTACCCCG AGATCGATGA CTCCATCGAG ATCAACATCA ACCCGTCCGA
CGTGCGCACC GACACCTACC GTGCCTCGGG CGCGGGCGGC CAGCACATCA ACAAGACCGA
TTCGGCCGTC CGTCTGACAC ACATCCCCAC GGGGATCGTG GTGCAGTGCC AGGATGGCCG
CAGCCAGCAC AGCAACCGCG ACGTGGCCTG GCAGCGCCTG CGCTCGCGCC TGTATGACTT
CGAAATGCGC AAGCGCATGG AAGAGCAGCA GAAGCTGGAA GACACCAAGA CCGACGTGGG
CTGGGGCCAC CAGATCCGCA GCTACGTGCT GGACAACAGC CGCATCAAGG ACCTGCGCAC
CAACGTCGAA GTCTCCGCCA CGCAGAAGGT GCTGGACGGC GACCTGGACG TGTTCATCGA
AGCCTCGCTC AAGCAGGGTG TCTAA
 
Protein sequence
MEAERINLIG TTLEDLTERT QELRRYLDYD AKFERLRTVN ASLEDPAVWN DPKKAQELGK 
EKKSLDAVVL TLQKLTTELA DNAELYEMSK EEGDEAGLTT IEAEAEKLRP LIEELEFRRM
FSNEADPLNC FVDIQAGAGG TEACDWASML LRQYLKYAER KGFKATVEEE TPGDVAGIKS
ATIKIEGEYA YGLLRTETGV HRLVRKSPFD SSGGRHTSFA SLFVYPEIDD SIEININPSD
VRTDTYRASG AGGQHINKTD SAVRLTHIPT GIVVQCQDGR SQHSNRDVAW QRLRSRLYDF
EMRKRMEEQQ KLEDTKTDVG WGHQIRSYVL DNSRIKDLRT NVEVSATQKV LDGDLDVFIE
ASLKQGV