| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ajs_2610 |
|---|
| Symbol | |
|---|
| ID | 4674145 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidovorax sp. JS42 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008782 |
|---|
| Strand | + |
|---|
| Start bp | 2777684 |
|---|
| End bp | 2779504 |
|---|
| Gene Length | 1821 bp |
|---|
| Protein Length | 606 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 639839677 |
|---|
| Product | peptidase M14, carboxypeptidase A |
|---|
| Protein accession | YP_986844 |
|---|
| Protein GI | 121594948 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG2866] Predicted carboxypeptidase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 22 |
|---|
| Fosmid unclonability p-value | 0.163339 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACGCCGA AGAATCTGCT CTCCCACCCA TACGCGCTGC CAATCGCCGC AATCGCTGCA
CGGCACCGCG CTACCGCGCT GCTGGGCGCA TTCCTGCTGT CCGCCTGCTC CAGCACGCCC
CTGCCTCCGT GGCCCGCGCA GTCCTCCCCC CCCGCGCCCA CTGGTCCGCA AACGTCCCGC
GCCGTACCGC CGCCGCTGGG AACAGTGCAG CGTGGCGAAG TCGTGCCCAG CCCAGTCACG
GTAACGCCCG TCGCCCCGGC CACCGAGCCG GCCTCCACCG CGCTCCCCTA CAGCGCGGCT
GTCGCGGCAC GCTTTCCCGC GCCTTCCGTG CGGTACGAAA CGCCGGGGCT CGCCGAGGGG
CGCCAGGCTT TCACCACCAA CGCTGAACTC ACCCAATGGC TGCGTAATCT GGCCACGGCG
CAGCGCGGCA CGACCCGTGT GCAAATGCTG GACCTGGGGG TATCGCAGCG CGGCACACCC
TTGCACGGCC TGGTGCTGAC CCGCGCGGCT GGCACCAACG TGGCCGCGCT GGACGCCAGC
CGCCGCCCCA CGGTGCTGCT GCTTGGGCAG CAACATGGCG ACGAACCCGC CGGCAGCGAG
GCATTGCTCG TGCTGGCACG CGAACTGGCA CAGGGTCTGC TGGAGCCCAT GCTGGAGCGC
ATCAACGTGA TCGTCGTTCC CCGCGCGAAT CCCGACGGAG CCGAGGCCGG CACGCGGGCC
ACGTCCAACG GCATCGACAT GAACCGGGAC CACCTGCTTT TGCAGACTCC GGAGGCCCAG
GCACTCGCCA AACTGGTGCG CAACTATCGC CCGATCGCCA TTTTCGATGC GCATGAATAC
ACCGTCACCG GACGGTTCCT CGAGAAATTC CATGCCATCC AACGCTACGA CGTGCTGCTG
CAGCACGCAA CGACGGCTAA CCTGCCGGAA TTCATGACCA AGGCAGCTCT GGAATGGTTC
CACCACCCCA TGATCAGGGC CCTGGAAGCG GAAGGCCTGA GCCAGGAGTG GTACTACACC
ACCTCGACCC GCGCCGAAGA CCTTCGCCTG TCCATGGGAG GGACGCAACC CGATACCGGC
CGCAACGTGA ATGGTCTGAA GAACGCCGTC AGCATGCTCG TGGAAACGCG CGGCGTGGGC
ATTGGCCGCA CCCACATCCA GCGGCGCGTG CACTCGCAGG TGACGGCCCT CACCAGTGCA
CTGCGCAGCA CCGTGGACCG CGCCGCCGAC TTGGAGCAGG TGCGCTCCTA TGAAGCGCGG
GACATTGCCT CCCAGGCATG CCGTGGCGAG ATCGTGGTGG AAGCCACGCA AACCCCCGGC
CAGCGCGACC TGGTCATGCT GGACCCACAG ACCGGCGCAG ACCGGACCCT GCGCGTGGAT
TGGAATTCCT CGCTGCAACT CAAGCCGGTC AAAAAACGCC ACCGCCCCTG CGGCTATTGG
TTGGCAAGCG GCGCAACGGA TGCAGTGGAG CGCCTGAAGC TGCTGGGCAT CCAGGTGATG
CACGTCGCCG AGGCGGGCTC CGTACTGGCC GACATCTATG AGGAAACCAG CCGGGAGAGC
TCCGAGCGAG AGGACGTGCG CGGAGCCATC CCTGGCGCCC GCCCGATCAT CCGCGCCACC
GTGACCCCCA TGCGCAGCGC CATCGACGTG CCGGGAGGCA GCTACTACGT GTCTCTCAAC
CAGCCCTTGG CCAATCTGGC CGTGGCAGCG CTGGAGCCCG ATACGCAGAA CAGCTATTTC
GCCAACCATG TCATCGGCCA GCTCGGCGAT GTGGCACGGG TCATGGCACC TCCATCGCTG
GTGTTTGAGG AGATGGACTG A
|
|---|
| Protein sequence | MTPKNLLSHP YALPIAAIAA RHRATALLGA FLLSACSSTP LPPWPAQSSP PAPTGPQTSR
AVPPPLGTVQ RGEVVPSPVT VTPVAPATEP ASTALPYSAA VAARFPAPSV RYETPGLAEG
RQAFTTNAEL TQWLRNLATA QRGTTRVQML DLGVSQRGTP LHGLVLTRAA GTNVAALDAS
RRPTVLLLGQ QHGDEPAGSE ALLVLARELA QGLLEPMLER INVIVVPRAN PDGAEAGTRA
TSNGIDMNRD HLLLQTPEAQ ALAKLVRNYR PIAIFDAHEY TVTGRFLEKF HAIQRYDVLL
QHATTANLPE FMTKAALEWF HHPMIRALEA EGLSQEWYYT TSTRAEDLRL SMGGTQPDTG
RNVNGLKNAV SMLVETRGVG IGRTHIQRRV HSQVTALTSA LRSTVDRAAD LEQVRSYEAR
DIASQACRGE IVVEATQTPG QRDLVMLDPQ TGADRTLRVD WNSSLQLKPV KKRHRPCGYW
LASGATDAVE RLKLLGIQVM HVAEAGSVLA DIYEETSRES SEREDVRGAI PGARPIIRAT
VTPMRSAIDV PGGSYYVSLN QPLANLAVAA LEPDTQNSYF ANHVIGQLGD VARVMAPPSL
VFEEMD
|
|---|
| |