Gene Ajs_2557 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAjs_2557 
Symbol 
ID4670886 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax sp. JS42 
KingdomBacteria 
Replicon accessionNC_008782 
Strand
Start bp2719214 
End bp2720098 
Gene Length885 bp 
Protein Length294 aa 
Translation table11 
GC content67% 
IMG OID639839622 
Producthypothetical protein 
Protein accessionYP_986791 
Protein GI121594895 
COG category[R] General function prediction only 
COG ID[COG2962] Predicted permeases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.209114 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.00319477 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGACCGCGA ATGCCTTGCC CGGCCACGCG CGGGCGGTCT GGCTGATGGT GGCCGTCACC 
TTCATGTGGT CCATCGCGGG CGTCGTCACG CGCCATCTGG ACCAGGCGCG CAGCTTTGAA
GTGACCTTCT GGCGCAGCTT CTTCATGCTG CTGTCGCTGT GCGTGATCCT GCCGGTGCTG
CAGGGCAGGG CGTTGCTGGC CAATCTGCGG CGCGGGGGGC GGGCGGTGTG GATCTCTGGC
GTGTGCTGGA GCGTGATGTT CACGGCCTTC ATGATCGCCA TATTGCTCAT CCCAGTGGCC
AGCGTATTGG TCACCATGGC CATCGGACCG CTGCTCACGG CATTGCTGGC GCGCGCCTTC
ATTGGCTACC ACATCGCGCC GCGCACCTGG TGCGCGATTG CATTGGCGGG CGCAGGCATC
GGGTGGATGT ATGGCTCGGG CATCTCCGGC CTGTCCGTGG TGGGCGTGCT TGTTGCCTTG
TGCGTGCCGG TCGCGGCGGC CGTGAACTGG GTGGTGGTGC AGCACTCGCA GCGCCAGGGC
CATGCGGTGG ACCTGGTGCC CGCCGTGCTG CTGGGGGCGG CGCTGTCCGC CCTGGCCACG
CTGCCGCTTG CGTGGCCGTT CCAGGCCACG GCGCGTGATT TGTCCCTTCT GGCCCTGCTG
GGTCTGGTCC AATTGGCGAT CCCCTGCGTG CTGGTGGTGT ACTGCGCGCG CGTGCTCAAG
GCGCCTGAGA TTGCGCTGCT GGGCCTGCTG GAAGTGATCT TTGGCATTCT GCTGGCCTGG
GTGGGCGCTG GAGAGCGCCC AGACCCGGCC GTGCTGATGG GAGGCGCGCT GGTGATCGGC
GCGCTCGTTT TCAATGAACT GCTTGTATGG AAGGAGCAAC AATGA
 
Protein sequence
MTANALPGHA RAVWLMVAVT FMWSIAGVVT RHLDQARSFE VTFWRSFFML LSLCVILPVL 
QGRALLANLR RGGRAVWISG VCWSVMFTAF MIAILLIPVA SVLVTMAIGP LLTALLARAF
IGYHIAPRTW CAIALAGAGI GWMYGSGISG LSVVGVLVAL CVPVAAAVNW VVVQHSQRQG
HAVDLVPAVL LGAALSALAT LPLAWPFQAT ARDLSLLALL GLVQLAIPCV LVVYCARVLK
APEIALLGLL EVIFGILLAW VGAGERPDPA VLMGGALVIG ALVFNELLVW KEQQ