Gene Ajs_2544 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAjs_2544 
Symbol 
ID4671500 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax sp. JS42 
KingdomBacteria 
Replicon accessionNC_008782 
Strand
Start bp2708170 
End bp2709159 
Gene Length990 bp 
Protein Length329 aa 
Translation table11 
GC content59% 
IMG OID639839609 
Producthypothetical protein 
Protein accessionYP_986778 
Protein GI121594882 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.00140957 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGTTGACA TGAAGAACGA CCCAACCATT GTCATCTGGG AAGGCTGCGA TCCCACTGTC 
TCGGAAGCCA TCGAGCAGTT TGAGGATCGC TGGCGGCCGT ATTCCGCCTC CTCGCGGCGC
TACCCCATCG TTGGGCTGAT ACAGGAACTC ATTGACCCCG CCGTGGCTGC ATACACGGCG
ACGCTGCCGC AACGCTACTT GGGCCACATC CCGGGAGCAG GAACAGGGGT GGGCTTCAGC
GGAATCATTC GACTGGTGGG ACTTGATGCG ATGGTTCGCA TGCAGCGGCA GTTGCTGCGC
CAGTTCATCA AAACGGAGGA CAGGCAGACC CCAAAGGATC GGCGGTTTGT TGCGACACTC
GAATCGTTGA TCGGGCTTGT ATGGGACTGC GCCTGCAAAC GGCCAACGAA GTCAAAGGTG
CGCGACACCC GGCTGAATGG CGAACGCCTT CAGGGGTTCT GCCGGTTCTG CGGATCACTC
GCCGAGCTAA CCTCATTCGC CGGCGGGAGC GATGATCCGA AGGCGGACGA TCCAGAGGAA
AAGCTTCGAC TAAGCAGCCT GTATTGCCTG GATCATCGGC CTAAATTGCC GAGCGGCGCA
TGGAACCCTG TCTACAGACA AGCAAGGCGA TCCCTCGCGC AATTCGACCT CGAACTGGCA
AGACTCAGCC AGCAATGCGC GAAGCCGGCC ACTGCCCAAG TGAAATCGGG CGATCAACTA
GTTGACAGCT ACTTCTTCCA CTATGTCGCG GGCCAGACCT TACAGCCGGC GGACAAGGCA
GAGCTGCGCA ATCAAGCACG ACTGATGGTG GACTCGAAGC TATCGGATCG CAAAAAGCAG
ATGCTGATGC TCCAGTGGTC TGGACTCAAT CAGTCGGACA TTGCGCGAAA GCTCGGCATC
GAGCGCCAAG CGGTATCGAA GGCGCTGGCG GCGATCCCCG CAATGTTCCA CTTGAGTACA
AAGCCTCGCT CACGGCGTCA ACCTAATTGA
 
Protein sequence
MVDMKNDPTI VIWEGCDPTV SEAIEQFEDR WRPYSASSRR YPIVGLIQEL IDPAVAAYTA 
TLPQRYLGHI PGAGTGVGFS GIIRLVGLDA MVRMQRQLLR QFIKTEDRQT PKDRRFVATL
ESLIGLVWDC ACKRPTKSKV RDTRLNGERL QGFCRFCGSL AELTSFAGGS DDPKADDPEE
KLRLSSLYCL DHRPKLPSGA WNPVYRQARR SLAQFDLELA RLSQQCAKPA TAQVKSGDQL
VDSYFFHYVA GQTLQPADKA ELRNQARLMV DSKLSDRKKQ MLMLQWSGLN QSDIARKLGI
ERQAVSKALA AIPAMFHLST KPRSRRQPN