| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ajs_2344 |
|---|
| Symbol | |
|---|
| ID | 4673214 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidovorax sp. JS42 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008782 |
|---|
| Strand | - |
|---|
| Start bp | 2486526 |
|---|
| End bp | 2487191 |
|---|
| Gene Length | 666 bp |
|---|
| Protein Length | 221 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 639839411 |
|---|
| Product | binding-protein-dependent transport systems inner membrane component |
|---|
| Protein accession | YP_986581 |
|---|
| Protein GI | 121594685 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG2011] ABC-type metal ion transport system, permease component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.251109 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 35 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTTCGAGA ACTTTTCTGA AATGATGCTG GAGCTGTTCG TCACCTCGCT GTGGGAGACG
ATCATCATGG TCGGCGTGTC CGGCATCGTC GGCGGCCTGG TGGGCATTCC GCTGGGTGTG
TTCCTGCGCC TCACGGACGC GGGCGGCGTG CTGGAGAACG GCCCGGCCAA CAAGATCGTG
GGCTGGATCG TGAATGCCGT GCGCTCCACG CCGTTCATCA TCCTGCTGGT GGCCATCATC
CCGTTCACGC GCTTCATCAC CGGCTCGTCC ATCGGCACCT GGGCGGCCGT GGTGCCGCTG
ACCATCGCCG CGGCGCCGTT CGTGGCGCGG CTGGTGGAGA CGGCGCTGCG CGAGGTCGAC
AACGGCCTGG TGGAGGCCGC GCAGTCCATG GGCGCCACCA CCGGCCAGAT CGTGTGGAAG
GTGCTGCTGC CCGAGGCGCT GCCCGGCATC GTGGCGGGCC TGACCATCAG CTTCGTGAGC
CTCACGGGCT ACTCGGCCAT GGCCGGGGCC ATCGGCGGCG GCGGGCTGGG CGACCTGGGC
ATCCGCTACG GCTACCAGCG CTTCCTGCCC GACATCATGC TGGCCGTGGT GGTCATCCTG
ATCTTCTTCG TGCAAGCCAT CCAGAGCCTG GGTGACTGGG CCGTGCGCCG CCTGTCGCAC
CGCTGA
|
|---|
| Protein sequence | MFENFSEMML ELFVTSLWET IIMVGVSGIV GGLVGIPLGV FLRLTDAGGV LENGPANKIV
GWIVNAVRST PFIILLVAII PFTRFITGSS IGTWAAVVPL TIAAAPFVAR LVETALREVD
NGLVEAAQSM GATTGQIVWK VLLPEALPGI VAGLTISFVS LTGYSAMAGA IGGGGLGDLG
IRYGYQRFLP DIMLAVVVIL IFFVQAIQSL GDWAVRRLSH R
|
|---|
| |