Gene Ajs_2328 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAjs_2328 
Symbol 
ID4674001 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax sp. JS42 
KingdomBacteria 
Replicon accessionNC_008782 
Strand
Start bp2469674 
End bp2470564 
Gene Length891 bp 
Protein Length296 aa 
Translation table11 
GC content73% 
IMG OID639839396 
ProductBeta-lactamase 
Protein accessionYP_986566 
Protein GI121594670 
COG category[V] Defense mechanisms 
COG ID[COG2367] Beta-lactamase class A 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones39 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACCGAA GAAGCTGGTT ACTGGGCGCC GCGCTGCTGC CCCTGGTAGG TTGTGCCCAA 
ACGGGGGTCG AGAAAAACAG GGCTCAGGCC ACACAGCAGT TGCAGGCCGC GCTGGGCCGG
GTGGAGCGGC GCGTGGGCGG GCGGCTAGGC GTGGCCGTGC TGGACACGGG CTCGGACGCC
CTTGCGACCT ACCGCGGCGA CGAGCGCTTT GCGCTGTGCA GCACCTTCAA GCTGCTGCTG
GCCGGCCAGG TGCTGCAGCG TGCGGACCAG GGGCTGGAGC GGCTGGATGC ACGCGTGCGT
TATGGCCGGG AGGATCTGGT GGAATATTCC CCGCGCACCG AGCCGCACGC GGGCGGCGCC
GGCATGACCG TGGCCGAGCT GTGCGAGGCC ACCATGGTGC TCAGCGACAA CAGCGCCGCC
AACCTGCTGC TGCGCCGCCA GGGCGGGCCC GCCGGCCTGA CGGCCTGGCT GCGCACGCTG
GGCGATGCGC ACACACGGCT GGACCGCATC GAGCCCGCGC TCAACGATGT GCCTGCGGGC
GAACTGCGCG ACACCACCAC GCCGCGCGCC ATGGTGCACA CCGTGCAGAA ACTGGTGCTG
GGCGATGCGC TGTCTGGCGA GGCACGGGCG CGGTTGCAGG GCTGGTTGCT GGGCAACCTC
ACGGGCGACA AGCGGCTGCG CGCGGGCATG CCGGCGGGCT GGCGCATCGG CGAGAAGACC
GGCACGGCCA ACGGCACTAG CAACGACGTG GGCGTGGTGT GGCCGGAGGG CGGGGCGCCG
GCCGTGGTGG CGTGCTATCT CACGCAGTGC CCCGCCGCGC CCGCGCAGCG CGACGCGGCG
ATTGCCGAGG TGGGGTCGCT GGCGGCCGCA TGGCTGGCGG CCGCGGGGTG A
 
Protein sequence
MDRRSWLLGA ALLPLVGCAQ TGVEKNRAQA TQQLQAALGR VERRVGGRLG VAVLDTGSDA 
LATYRGDERF ALCSTFKLLL AGQVLQRADQ GLERLDARVR YGREDLVEYS PRTEPHAGGA
GMTVAELCEA TMVLSDNSAA NLLLRRQGGP AGLTAWLRTL GDAHTRLDRI EPALNDVPAG
ELRDTTTPRA MVHTVQKLVL GDALSGEARA RLQGWLLGNL TGDKRLRAGM PAGWRIGEKT
GTANGTSNDV GVVWPEGGAP AVVACYLTQC PAAPAQRDAA IAEVGSLAAA WLAAAG