| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ajs_2285 |
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| Symbol | |
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| ID | 4671915 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax sp. JS42 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008782 |
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| Strand | + |
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| Start bp | 2417354 |
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| End bp | 2419432 |
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| Gene Length | 2079 bp |
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| Protein Length | 692 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 639839351 |
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| Product | peptidase U32 |
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| Protein accession | YP_986523 |
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| Protein GI | 121594627 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0826] Collagenase and related proteases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.437271 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.0318374 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGCCAGACA CGTACCTGCC GCCGGGTACC CCCGCCCCGG CACGGCCGGG CGCAGACCGG
GATAATTCAC GCCCTATGTC CCTCCTGCCC CACCAGCTCG AACTGCTCTC CCCCGCGCGC
GACGCCGACA TCGGCATCGA GGCCGTGAAC CACGGCGCCG ACGCCGTCTA CATCGGCGGC
CCCGCCTTTG GCGCGCGGGC CACGGCGGGC AACGACATCC GCGACCTGGA GCGGCTCATT
CAGCATGCGC ACCGTTTCAA CAGCCGCATC TTCATCACGC TGAACACCAT CCTGCGCGAC
GACGAGCTGG AGGGCGCCCG CCAGATGGCC TGGCAGGTGT ACGAGGCCGG CGCCGACGCG
CTCATCATCC AGGACATGGG CCTGCTGGAG CTGGACCTGC CGCCGATTCA GCTGCACGCC
AGCACGCAGA CCGATATCCG CACGCCCGAG AAGGCGCGCT TTCTGCAGGA CGCAGGCCTG
TCGCAGATCG TGATTGCGCG CGAGCTGGAT CTGCAGCAGA TCCAGGCCAT TCGCGAAGCC
ACCGACCCCA GCCGCACCAC CATTGAATTC TTCGTGCACG GCGCGCTGTG CGTGGCCTAT
TCGGGGCAGT GCTTCATCAG CCATGCCCAC ACCGGGCGCA GCGCCAACCG GGGCGACTGC
AACCAGGCCT GCCGCCTGCC CTACGAGGTG CTGGACGGCG CCGGCCGCAT CATCGCGCAC
GAGAAGCACG TGCTGTCGAT GAAGGACAAC AACCAGAGCG ACAACCTGCG CGCGCTGATC
GACGCCGGCG TGCGCAGCTT CAAGATCGAG GGCCGCTACA AGGACATGGG TTACGTGAAG
AACATCACCG CCCACTACCG CAAGCTGCTG GACGAAATCA TCGAGGAGCG CGAGTTCACG
GGCGAGCCGC TGGCGCGCTC GTCCAGCGGC CGCACCACCT TCACGTTCGA GCCCGATCCC
GACCAGAACT TCAACCGCGA GTTCACCGAC TACTTCGTCA ACGGCCGCAA GGAGGACATC
GGCGCCTTCG ACACCCCGAA GACGCCGGGC CGCGCCATCG CCTGGGTGAC GCAGATCGGC
GACAACTGGT TCGAGCTGGA GGTGAGCGAC AAAGCCACCG CACTGCACAA CGGCGACGGC
CTGTGCTACT ACGACCTGCA AAAGGAACTG GTGGGCGTGC ACATCAACCG CGCCGAATGC
GTGGCGCCCA AGAAGGGCAT CTGGCGCGTG TTCCCCAAGA ACGAGATCAC CGAGTTCAAG
GACCTGCGCA AGGGCTTGGA GATCAACCGC AACCGCGACA TGGACTGGGT GCGCACGCTG
GAGAAGAAAT CCAGCGACCG TCGCATCGGC CTGTGGGCCC ATCTGGCCGA GACCGCCGAC
GGCTTTGCGC TCACGCTCAC CGACGAAGAC GGCTTCGTGG GCAGTGCGTC GGTCATCCAG
CCCCACCAGC CAGCCACCGA TGCGGTCAAG GCGGAGGCCA CGCTGCGCGA TCAGCTCGGA
CGCTTTGGCG CCACCCGCTT TGCCGTGCAC GCCATGGCGC TGCAGCTCTC GCAGCCGTGG
TTCGTGCCCG CATCGGCACT GAATCAGTTG CGCCGTGACG CCGTGGTCGC GCTGGAGGAC
GCGCGCACCG CCGGCTTCGT GCGCCTGCCG CGCGCCGTGC CGGTGCAGCC ACCCGTGCCC
TTCCCCGAAG ACACGCTGAG CTACCTGGCC AATGTGTTCA ACCACAAGGC GCACGACTTC
TACGTGAAGC ATGGCGTGAA GGTGATCGAC GCCGCCTACG AATCGAAAGA GGAAGAAGGT
GAAGTCAGCC TGATGATCAC CAAGCACTGC GTGCGCTTCT CCATGAGCCT GTGCCCCAAG
CAGGCCAAGG GTGTGATCGG CGTAAAGGGC ACCATCAAGG CCGAGCCGCT GCAGCTCATC
AACGGCAAGG AAAAACTCAC CCTGCGCTTT GACTGCAAGC CCTGCGAGAT GCACGTGGTG
GGCAAGATGA AGAAGTCGGT GATGAACCAG CACCTCAAGG ACATGCAGGC CCAGCCCCTG
CAGTTCTACC GCACGCGACC GGCGCCCACC TCCGCCTGA
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| Protein sequence | MPDTYLPPGT PAPARPGADR DNSRPMSLLP HQLELLSPAR DADIGIEAVN HGADAVYIGG
PAFGARATAG NDIRDLERLI QHAHRFNSRI FITLNTILRD DELEGARQMA WQVYEAGADA
LIIQDMGLLE LDLPPIQLHA STQTDIRTPE KARFLQDAGL SQIVIARELD LQQIQAIREA
TDPSRTTIEF FVHGALCVAY SGQCFISHAH TGRSANRGDC NQACRLPYEV LDGAGRIIAH
EKHVLSMKDN NQSDNLRALI DAGVRSFKIE GRYKDMGYVK NITAHYRKLL DEIIEEREFT
GEPLARSSSG RTTFTFEPDP DQNFNREFTD YFVNGRKEDI GAFDTPKTPG RAIAWVTQIG
DNWFELEVSD KATALHNGDG LCYYDLQKEL VGVHINRAEC VAPKKGIWRV FPKNEITEFK
DLRKGLEINR NRDMDWVRTL EKKSSDRRIG LWAHLAETAD GFALTLTDED GFVGSASVIQ
PHQPATDAVK AEATLRDQLG RFGATRFAVH AMALQLSQPW FVPASALNQL RRDAVVALED
ARTAGFVRLP RAVPVQPPVP FPEDTLSYLA NVFNHKAHDF YVKHGVKVID AAYESKEEEG
EVSLMITKHC VRFSMSLCPK QAKGVIGVKG TIKAEPLQLI NGKEKLTLRF DCKPCEMHVV
GKMKKSVMNQ HLKDMQAQPL QFYRTRPAPT SA
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